Pairwise Alignments

Query, 469 a.a., deoxyribodipyrimidine photo-lyase from Vibrio cholerae E7946 ATCC 55056

Subject, 482 a.a., deoxyribodipyrimidine photolyase from Dechlorosoma suillum PS

 Score =  319 bits (817), Expect = 1e-91
 Identities = 205/489 (41%), Positives = 264/489 (53%), Gaps = 43/489 (8%)

Query: 3   LVWFRRDLRSFDNTALTAALNSGDPVAAMYIATPEQWHQHHLAPIQADLIWRRLAELQQE 62
           LVWFRRDLR +D+ AL  AL S   V   ++   +        P ++D   RR+  +++ 
Sbjct: 6   LVWFRRDLRDYDHAALYHALKSARRVWCAFVFDSDILEA---LPGRSD---RRVEFIRES 59

Query: 63  LAALNVPLFYQQ---VADFQAAAVAVSQLAKTLNATQVLANRDYELDEQQRDQLAQQLLS 119
           LA L+V L  +    +     AA  ++ LA+ L    V ANRDYE   + RD      L 
Sbjct: 60  LAELHVALQAKGGGLMVRHGPAAAEIAALARQLGVVAVFANRDYEPRAKARDAAVAADLE 119

Query: 120 EQGIIWSAFDDKCVLPPGSVRTKQGEFFKVFTPFKRAWLTLFQPPVIGKNRPVALWN--- 176
             GI    F D+ V     V TK G  + VFTP+K  WL   +   + +  PV  ++   
Sbjct: 120 RDGIALHLFKDQAVFDGDEVLTKGGTPYTVFTPYKNCWLGKLEDFHV-RPYPVDRYSGHL 178

Query: 177 --------VPSALAELVWHPEQAFDYPRIDSTPWAADFETVRAQLRDFCRERVQDYHQAR 228
                   VPS LA++ + P    D  RI   P  +      A+ +DF R+R++ Y + R
Sbjct: 179 APPPDGGGVPS-LADIGFLPT---DLERIGVVPGMSGGA---ARWQDF-RQRLERYAEQR 230

Query: 229 DFPAREGTSSLSPYLAIGVLSARQCVARLYHESSMGELSEGAQVWLSELIWREFYQHLVA 288
           DFPA +G S LS YL  G LS RQ     +          GA  WLSELIWR+FY  ++ 
Sbjct: 231 DFPAVKGVSYLSVYLRFGCLSIRQLAGEAWRSGG-----PGAATWLSELIWRDFYFMVLD 285

Query: 289 IEPNLSKSRDFVEWGARLEWWNDNEKFQLWCEGKTGYPIVDAAMRQLNQTGWMHNRLRMI 348
             P L       E+  R+ W         W EG+TGYP+VDAAMRQL QTGWMHNRLRM+
Sbjct: 286 RFPQLPDGCFKPEFD-RVLWDEAPALLAAWREGRTGYPLVDAAMRQLAQTGWMHNRLRMV 344

Query: 349 VASFLTKDLHIDWRWGERYFMSRLIDGDYAANNGGWQWCASTGCDGQPYFRIFNPVSQGE 408
           VASFLTKDL +DWR GE +F   L+D D +ANNGGWQW ASTGCD QP+FRIFNPV+Q E
Sbjct: 345 VASFLTKDLGLDWRLGEGHFADLLLDFDLSANNGGWQWAASTGCDAQPWFRIFNPVTQSE 404

Query: 409 KFDPNGDFIRRWVPELRSVSSAYIHQPWTYPAVNSVL--------YPARLVDHKQEREVT 460
           KFDP G FIRR+VPEL  V   +IH PW    +            YPA +VDH   R+ T
Sbjct: 405 KFDPQGRFIRRYVPELAGVPDKHIHAPWRMAPLEQQAAGVIIGRDYPAPVVDHNLARQRT 464

Query: 461 LRLYKTAKG 469
           L  ++  KG
Sbjct: 465 LARFEAVKG 473