Pairwise Alignments

Query, 469 a.a., deoxyribodipyrimidine photo-lyase from Vibrio cholerae E7946 ATCC 55056

Subject, 494 a.a., Deoxyribodipyrimidine photo-lyase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 53.1 bits (126), Expect = 2e-11
 Identities = 93/370 (25%), Positives = 148/370 (40%), Gaps = 40/370 (10%)

Query: 3   LVWFRRDLRSFDNTAL----TAALNSGDPVAAMYIATPEQWHQHHLAPI-QADLIWRRLA 57
           L W  R+ R+ DN AL      A   G P+A ++       +    A I Q   + R + 
Sbjct: 44  LYWMHREHRARDNWALLHAHAEAARLGAPLAVVWCLA----NSFLGATIRQFGFLLRGME 99

Query: 58  ELQQELAALNVPLFYQQVADFQAAAVAVSQLAKTLNATQVLANRDYELDEQQRDQLAQQL 117
           E Q+ LAA  +PL   +    +     V + A++ NA  V+   D+++   +R  LA   
Sbjct: 100 ETQRHLAAAGIPLVVLRGNPPEE----VVRYARSANAALVVT--DFDVLRLKRTWLASAA 153

Query: 118 LSEQGII-WSAFDDKCVLPPGSVRTKQGEFFKVFTPFKRAWLTLFQPPVIGKNRPVALWN 176
               G+      D + V+P      K+    +   P     L  F  P+       ++  
Sbjct: 154 RGLAGVCSLHEVDGRNVVPCRVASPKREYAARTLRPKIHRLLPEFLTPIPALPPASSVSG 213

Query: 177 VPSA-LAELVWHPEQAFDYPRIDST-------PWAADF----ETVRAQLRDFCRERVQDY 224
             S  + ++ W   +  D   +D T       P   D     +  RA L DF   R+  Y
Sbjct: 214 ASSVPVPDVDWASLR--DNLAVDRTVAEVGPLPGMPDIAPGEDAARAALDDFIHARLHRY 271

Query: 225 HQARDFPAREGTSSLSPYLAIGVLSARQCVARLYHESSMGELSEGAQVWLSELI-WREFY 283
           H   D P   G S LSPYL  G+LSA++  A L  ++ +    +    +L ELI  RE  
Sbjct: 272 HLRND-PNAHGVSGLSPYLHFGMLSAQR--AALAAQAHLEAPDDCRASFLEELIVRRELA 328

Query: 284 QHLVAIEPNLSKSRDFVEWG-ARLEWWNDNEKFQLWCE-----GKTGYPIVDAAMRQLNQ 337
            +      +      F +W  A L+    + +  L+ E      +T  P+ +AA  ++  
Sbjct: 329 DNFCLHAQDYDAVTCFPDWALATLDKHRHDPRPALYDEAQLAAARTADPLWNAAQTEMVC 388

Query: 338 TGWMHNRLRM 347
            G MH  LRM
Sbjct: 389 AGRMHGYLRM 398