Pairwise Alignments

Query, 469 a.a., deoxyribodipyrimidine photo-lyase from Vibrio cholerae E7946 ATCC 55056

Subject, 467 a.a., deoxyribodipyrimidine photolyase from Marinobacter adhaerens HP15

 Score =  378 bits (970), Expect = e-109
 Identities = 205/471 (43%), Positives = 269/471 (57%), Gaps = 11/471 (2%)

Query: 2   RLVWFRRDLRSFDNTALTAALNSGDPVAAMYIATPEQWHQHHLAPIQADLIWRRLAELQQ 61
           +LVWFR DLR  DN ALTAA  S + V A +I TP+QW +H  +P +   +      L +
Sbjct: 3   QLVWFRNDLRVADNPALTAACESSEEVRACFILTPDQWQEHDWSPARVQFVVAHANALAE 62

Query: 62  ELAALNVPLFYQQVADFQAAAVAVSQLAKTLNATQVLANRDYELDEQQRDQLAQQLLSEQ 121
           ELA L +PL + Q   F  +   +    +    T +  N +Y ++E++RD+  +    + 
Sbjct: 63  ELAKLGIPLSFIQAKRFDDSLGKLESHCEEHGVTALHFNEEYGVNERKRDKALKHRFDQL 122

Query: 122 GIIWSAFDDKCVLPPGSVRTKQGEFFKVFTPFKRAWLTLFQPPVIGKNRPVALWNVPSAL 181
           GI    + D+ V P G + T+Q + + VFTPF R W +  +    G      L+  P A 
Sbjct: 123 GIAVRKYRDQTVAPVGEILTQQNDPYSVFTPFSRRWRSWIEETHPG------LFPTPKAR 176

Query: 182 AELVWHPEQAFDYP---RIDSTPWAADFE-TVRAQLRDFCRERVQDYHQARDFPAREGTS 237
              V  PEQ    P   R    P  A  E     QL  F  +R   Y + RDFPA +GTS
Sbjct: 177 GNAV-SPEQIDAIPEAFRDAPEPLVATGEDAAHDQLERFLEKRGGAYKEKRDFPAIDGTS 235

Query: 238 SLSPYLAIGVLSARQCVARLYHESSMGELSEGAQVWLSELIWREFYQHLVAIEPNLSKSR 297
            +SPYLA GVLS RQC+         G   EG   W++E+ WR+FY +++   P +S  R
Sbjct: 236 QISPYLANGVLSGRQCLIAGRQAQGAGGNQEGLGTWITEIAWRDFYINILYHFPRVSMHR 295

Query: 298 DFVEWGARLEWWNDNEKFQLWCEGKTGYPIVDAAMRQLNQTGWMHNRLRMIVASFLTKDL 357
            F      LEW N  ++F+ W  G TG PIVDAAMRQLNQTGWMHNRLRMI A +LTK+L
Sbjct: 296 AFKPETETLEWNNPGDRFEAWKTGNTGVPIVDAAMRQLNQTGWMHNRLRMITAMYLTKNL 355

Query: 358 HIDWRWGERYFMSRLIDGDYAANNGGWQWCASTGCDGQPYFRIFNPVSQGEKFDPNGDFI 417
            IDWR GE YFMS+LIDG  A+NNGGWQW ASTG D  PYFR+FNPV+Q E+FDP+GDFI
Sbjct: 356 FIDWRLGEAYFMSKLIDGFLASNNGGWQWSASTGTDAAPYFRVFNPVTQSERFDPDGDFI 415

Query: 418 RRWVPELRSVSSAYIHQPWTYPAVNSVLYPARLVDHKQEREVTLRLYKTAK 468
           R WVPEL  + S  IH P     V    YP ++VD K+ R+  +  ++  K
Sbjct: 416 REWVPELAKLDSKRIHDPGAKGGVIPKGYPRQIVDLKESRKEAIAKFQELK 466