Pairwise Alignments

Query, 469 a.a., deoxyribodipyrimidine photo-lyase from Vibrio cholerae E7946 ATCC 55056

Subject, 440 a.a., deoxyribodipyrimidine photolyase from Marinobacter adhaerens HP15

 Score =  148 bits (374), Expect = 3e-40
 Identities = 134/430 (31%), Positives = 195/430 (45%), Gaps = 25/430 (5%)

Query: 3   LVWFRRDLRSFDNTALTAALNSGDPVAAMYIATPEQWHQHHL-APIQADLIWRRLAELQQ 61
           L WF RDLR  DN +L AA  S D +  +Y+  P  +    L +    D  WR L +   
Sbjct: 4   LYWFTRDLRLHDNASLLAASKS-DMLLCLYVVDPRWFAPGPLQSKAMGDHRWRFLWQSLM 62

Query: 62  ELAALNVPLFYQQVADFQAAAVAVSQLAKTLNATQVLANRDYELDEQQRDQLAQQLLSEQ 121
            L     PL  +    F      + QLA   +  +V+ +R     E  + Q  +  L + 
Sbjct: 63  ALERSLRPLGQRLHIAFGEPETVIPQLAHAHSIERVVRSRLPGTQEAGQWQAIKDRLPKA 122

Query: 122 GIIWSAFDDKCVLPPGSVRTKQGEFFKVFTPFKRAWLTLFQPPVIGKNRPVALW-NVPSA 180
             ++  F+   +   GS+     E    F+ F++      Q    G      L     +A
Sbjct: 123 --VFQQFETLSLFTEGSLPMALEELPDTFSQFRK------QVEKTGDRCSERLRIRTLTA 174

Query: 181 LAELVWHPEQ-AFDYPRIDSTPWAADF----ETVRAQLRDFC--RERVQDYHQARD-FPA 232
           L      PE    D P I        F        A+L++F      +  Y + R+    
Sbjct: 175 LPPPPGFPEDNRGDCPPIPEPVHPLQFMGGEAAGLARLQEFLYGNHSIDRYKETRNALDT 234

Query: 233 REGTSSLSPYLAIGVLSARQCVARLYHESSMGELSEGAQVWL-SELIWRE-FYQHLVAIE 290
            + +S  SP+LA G LS R+ VA    E    E    +  WL  EL+WRE FY + +   
Sbjct: 235 WDASSKFSPWLANGCLSVRE-VAETITEYEASETKNESTYWLWFELLWREYFYWYALKHG 293

Query: 291 PNLSKSRDFVEWGARLEWWNDNEKFQLWCEGKTGYPIVDAAMRQLNQTGWMHNRLRMIVA 350
            NL + RD V+   R   +  + +F+ WC+G T YPIV+AAM QL +TG+M NR R +VA
Sbjct: 294 ANLFR-RDGVQRKRRHGTFYGH-RFKAWCQGNTEYPIVNAAMNQLRETGYMSNRARQLVA 351

Query: 351 SFLTKDLHIDWRWGERYFMSRLIDGDYAANNGGWQWCASTGCDGQPYFRIFNPVSQGEKF 410
           S    +L +DWR+G  +F  +LID D  +N G WQ+ A  G D +   R FN   Q +++
Sbjct: 352 SCFINELGLDWRYGAAWFEEQLIDYDVGSNYGNWQYLAGVGADPRG-LRQFNLEKQTQQY 410

Query: 411 DPNGDFIRRW 420
           DP G FI RW
Sbjct: 411 DPTGTFIDRW 420