Pairwise Alignments

Query, 469 a.a., deoxyribodipyrimidine photo-lyase from Vibrio cholerae E7946 ATCC 55056

Subject, 538 a.a., deoxyribodipyrimidine photo-lyase from Marinobacter adhaerens HP15

 Score =  149 bits (375), Expect = 3e-40
 Identities = 136/479 (28%), Positives = 203/479 (42%), Gaps = 50/479 (10%)

Query: 3   LVWFRRDLRSFDNTALTAALNSGDPVAAMYIATPEQWHQHHLAPIQADLIWRRLAELQQE 62
           +VWF+RDLR+ D+  L AA + G+PV  +Y+   + W     +  Q   I   L +L ++
Sbjct: 31  VVWFKRDLRTRDHAPLVAAASLGEPVIPLYVIEDDYWQLPDTSGRQWAFIRDSLDDLDRQ 90

Query: 63  LAALNVPLFYQQVADFQAAAVAVSQLAKTLNATQVLANRDYELDEQQRDQLAQQLLSEQG 122
           L      L             +V+   K L A Q +            D++      E G
Sbjct: 91  LRKAGSQLL--------VIRGSVTDALKKLQARQGI------------DRIFCH--QETG 128

Query: 123 IIWSAFDDKCVL---PPGSVRTKQGEFFKVFTPFK------RAWLTLFQPPVIGKNRPVA 173
             W+   D+ V+       V  ++   F V           RAW  L + PV+    P A
Sbjct: 129 GHWTFERDRAVIGWCSENQVEFREWNQFGVVRRLSDRDVWDRAWTELMRQPVL--EAPTA 186

Query: 174 LWNVPSALAELVWHPEQAFDYPRIDSTPWAADFETVRAQ--LRDFCRERVQDYHQARDFP 231
           +    +   +      Q F+ P  DS P      + R +  L  F   R   Y      P
Sbjct: 187 IPTSDTLKTDWAADNGQGFEVP--DSCPDRQKGGSARGEKLLESFLDRRCVGYQYNISSP 244

Query: 232 --AREGTSSLSPYLAIGVLSARQCV----ARLYHESSMGELSEGAQVWLSELIWREFYQH 285
             A    S LSP++A G +S R+      A   H +++    +    + S L W   +  
Sbjct: 245 NTAVRACSRLSPHIAYGTVSLREIYQEAKATGNHRNTLPRKKKSLTSFRSRLHWHCHFIQ 304

Query: 286 LVAIEPNLSKSRDFVEWGARLEWWNDNEKFQLWCEGKTGYPIVDAAMRQLNQTGWMHNRL 345
            +  EP L       E  A     ND+E+ Q W EG+TG+P+VDA+MR L  +GW++ R+
Sbjct: 305 KLEDEPELEFRAMHREMEALKTGPNDSERLQRWQEGQTGWPLVDASMRALAHSGWINFRM 364

Query: 346 RMIVASFLTKDLHIDWRWGERYFMSRLIDGDYAANNGGWQWCASTGCDGQPYFRIFNPVS 405
           R ++ +  +  L + WR      ++RL   D+       Q    +G  G    RI+NPV 
Sbjct: 365 RAMLMAIASYQLWLHWR-DPALHLARLFT-DFEPGIHYSQTQMQSGLTGINALRIYNPVL 422

Query: 406 QGEKFDPNGDFIRRWVPELRSVSSAYIHQPWTY-PA----VNSVLYPARLVDHKQEREV 459
           Q +K DP G+FIRRW+PEL  V S  IH PW   PA         Y A + DH+Q   V
Sbjct: 423 QSQKLDPEGEFIRRWIPELAGVPSEMIHTPWLMTPAQKERYGGNTYIAPVCDHEQAARV 481