Pairwise Alignments

Query, 469 a.a., deoxyribodipyrimidine photo-lyase from Vibrio cholerae E7946 ATCC 55056

Subject, 474 a.a., deoxyribodipyrimidine photo-lyase from Pantoea sp. MT58

 Score =  420 bits (1079), Expect = e-122
 Identities = 225/474 (47%), Positives = 285/474 (60%), Gaps = 15/474 (3%)

Query: 3   LVWFRRDLRSFDNTALTAALNSGDP-VAAMYIATPEQWHQHHLAPIQADLIWRRLAELQQ 61
           LVW R DLR  DN AL AA    D  V A+Y++TPEQW QH ++P QA  I   L E+Q 
Sbjct: 5   LVWLRNDLRINDNLALHAACRDSDAKVIALYLSTPEQWQQHDMSPKQAAFIHASLLEVQS 64

Query: 62  ELAALNVPLFYQQVADFQAAAVAVSQLAKTLNATQVLANRDYELDEQQRDQLAQQLLSEQ 121
            LA   +PL YQ    F  +  A+++  +     Q+  N  YE++E+QRD  A++ L + 
Sbjct: 65  ALAERGIPLHYQACHAFSDSIDALAEFCEKQKVDQLFYNYQYEVNERQRDARAEKRLDDA 124

Query: 122 GIIWSAFDDKCVLPPGSVRTKQGEFFKVFTPFKRAWLTLFQ---PPVIGKNRPVALWNVP 178
           G+I   FDD  +LPPGSV++     +KVFTPF +A++   Q   P  +   +P       
Sbjct: 125 GVICQGFDDSLLLPPGSVQSGDRSMYKVFTPFSKAFVRRLQQSLPECVPAPKP------- 177

Query: 179 SALAELVWHPEQAFDYPR--IDSTPWAADFETVRAQLRDFCRERVQDYHQARDFPAREGT 236
              + L   P  AFDYP    D   + A       +LR F  + V DY   RD PA + T
Sbjct: 178 REGSPLKVTPIPAFDYPTKAFDEDLFPAGEAAALKRLRHFATKPVIDYPAKRDLPALDAT 237

Query: 237 SSLSPYLAIGVLSARQCVARLYHESSMGELSEGAQVWLSELIWREFYQHLVAIEPNLSKS 296
           S LS YLA GVLS RQC+ R+ HE      +  A  WL+ELIWREFY+HL+   P L + 
Sbjct: 238 SRLSVYLATGVLSPRQCLHRVLHEHPDALDNSRAFTWLNELIWREFYRHLLVAYPALCRH 297

Query: 297 RDFVEWGARLEWWNDNEKFQLWCEGKTGYPIVDAAMRQLNQTGWMHNRLRMIVASFLTKD 356
           + F++W   +EW  ++  F  W  G+TGYPIVDAAMRQ+   GWMHNRLRMI ASFL KD
Sbjct: 298 QPFIDWTRNVEWQRNDAHFDAWKAGRTGYPIVDAAMRQMKALGWMHNRLRMITASFLVKD 357

Query: 357 LHIDWRWGERYFMSRLIDGDYAANNGGWQWCASTGCDGQPYFRIFNPVSQGEKFDPNGDF 416
           L IDWR GERYFM +LIDGD AANNGGWQW ASTG D  PYFRIFNP +QGE+FD  GDF
Sbjct: 358 LLIDWREGERYFMQQLIDGDLAANNGGWQWAASTGTDAAPYFRIFNPTTQGERFDEKGDF 417

Query: 417 IRRWVPELRSVSSAYIHQP--WTYPAVNSVLYPARLVDHKQEREVTLRLYKTAK 468
           IR ++PEL  V  + IHQP  W       + YPA +VDHK  R+ TL  ++ AK
Sbjct: 418 IRHYLPELADVPDSDIHQPHVWAEKHHKKLDYPAPIVDHKAARKKTLDAFERAK 471