Pairwise Alignments

Query, 469 a.a., deoxyribodipyrimidine photo-lyase from Vibrio cholerae E7946 ATCC 55056

Subject, 480 a.a., deoxyribodipyrimidine photo-lyase from Klebsiella michiganensis M5al

 Score =  440 bits (1131), Expect = e-128
 Identities = 235/474 (49%), Positives = 288/474 (60%), Gaps = 17/474 (3%)

Query: 3   LVWFRRDLRSFDNTALTAALNSGDP---VAAMYIATPEQWHQHHLAPIQADLIWRRLAEL 59
           LVWFR DLR  DN AL AA    DP   V  ++IATP QW QH +A  QA  I   L  L
Sbjct: 5   LVWFRADLRMHDNLALAAACR--DPHAEVLGLFIATPGQWRQHGMAARQAAFIVSHLHSL 62

Query: 60  QQELAALNVPLFYQQVADFQAAAVAVSQLAKTLNATQVLANRDYELDEQQRDQLAQQLLS 119
           Q  LA   +PL  +Q  DF A+   ++        T +  N  YE++E+QRD   +  L+
Sbjct: 63  QAALAEKGIPLHVEQAEDFAASVKRLASFCGQQQVTHLFYNYQYEINERQRDAAVENTLA 122

Query: 120 EQGIIWSAFDDKCVLPPGSVRTKQGEFFKVFTPFKRAWLTLFQ---PPVIGKNRPVALWN 176
             G+    FDD  +LPPGSV T   E +KVFTPFK A+L   Q   P  +   +  A   
Sbjct: 123 --GVTCQGFDDSVLLPPGSVLTGNREMYKVFTPFKNAFLRRLQEALPECVAAPKVRASGP 180

Query: 177 VPSALAELVWHPEQAFDYPRIDSTPWAADFETVRAQLRDFCRERVQDYHQARDFPAREGT 236
           + +A    + +P+  FD     S  +AAD ++  A+LR FC+++  DY Q RD PA EGT
Sbjct: 181 IAAASNVEIDYPQTPFD-----SELFAADEKSAIARLRGFCQQKAADYEQQRDLPAVEGT 235

Query: 237 SSLSPYLAIGVLSARQCVARLYHESSMGELSEGAQVWLSELIWREFYQHLVAIEPNLSKS 296
           S LSP LA+G LS RQC+ RL  E       E   VWL+ELIWREFY+HL+   PNL K 
Sbjct: 236 SRLSPCLAVGALSPRQCLHRLLVEQPRALDGEAGAVWLNELIWREFYRHLMVYYPNLCKG 295

Query: 297 RDFVEWGARLEWWNDNEKFQLWCEGKTGYPIVDAAMRQLNQTGWMHNRLRMIVASFLTKD 356
           R F+ W   + W +D    Q W  G+TG+PIVDAAMRQLN TGWMHNRLRMIVASFL KD
Sbjct: 296 RPFIGWTDNVAWLDDKSALQAWQRGQTGFPIVDAAMRQLNTTGWMHNRLRMIVASFLVKD 355

Query: 357 LHIDWRWGERYFMSRLIDGDYAANNGGWQWCASTGCDGQPYFRIFNPVSQGEKFDPNGDF 416
           L IDWR GERYF+ +LIDGD AANNGGWQW ASTG D  PYFRIFNP +QGE+FD  G F
Sbjct: 356 LRIDWRLGERYFIEQLIDGDLAANNGGWQWAASTGTDAAPYFRIFNPTTQGERFDKAGRF 415

Query: 417 IRRWVPELRSVSSAYIHQPWTYPAVNSVL--YPARLVDHKQEREVTLRLYKTAK 468
           IR W+PEL  V    +HQPW +     V   YP  +VDHKQ R  TL  ++ A+
Sbjct: 416 IRHWLPELAGVPEKAVHQPWLWAEKQGVKLDYPRPIVDHKQARLETLAAWEAAR 469