Pairwise Alignments

Query, 469 a.a., deoxyribodipyrimidine photo-lyase from Vibrio cholerae E7946 ATCC 55056

Subject, 476 a.a., Deoxyribodipyrimidine photo-lyase (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  228 bits (582), Expect = 3e-64
 Identities = 165/474 (34%), Positives = 229/474 (48%), Gaps = 23/474 (4%)

Query: 5   WFRRDLRSFDNTALTAALNSGDPVAAMYIATPEQWHQHHLAPIQADLIWR---RLAELQQ 61
           W RRDLR  DN AL AA+ +G PV  +++  P       L  + A   WR     A L  
Sbjct: 13  WVRRDLRLSDNRALVAAVETGAPVIPVFLCDPI------LDSLGAAPKWRFGLGAAALDA 66

Query: 62  ELAALNVPLFYQQVADFQAAAVAVSQLAKTLNATQVLANRDYELDEQQRDQLAQQLLSEQ 121
            L      L Y++    +     VS+      A  V  +R Y+ D+  RD+  +  L + 
Sbjct: 67  ALRDRGSRLIYRKGDALETLRALVSETG----AETVYWSRAYDPDQVARDKAVKSGLQDD 122

Query: 122 GIIWSAFDDKCVLPPGSVRTKQGEFFKVFTPFKRAWLTLFQP-PVIGKNRPVALWNVPSA 180
           G+   +F    ++ P +V T  G F+KV+TPF +A      P P    +R  A  N P +
Sbjct: 123 GVDARSFTGHLLIEPWTVETGSGGFYKVYTPFWKAVRDRAMPEPQPAPDRIPAPDNWPES 182

Query: 181 LAELVWHPEQAFDYPRIDSTPWAADFE-TVRAQLRDFCRERVQDYHQARDFPAREGTSSL 239
                W    A +       P  A  E   R +L  F   RV DY +ARD P  EGTS L
Sbjct: 183 DRLDYWALGAAMNRGAAIVAPHLAIGEDAARGRLGAFIAHRVGDYDRARDIPGIEGTSRL 242

Query: 240 SPYLAIGVLSARQCVARLYHESSMGELSEGAQVWLSELIWREFYQHLVAIEPNLSKSRDF 299
           S  L  G +    C      + ++ E   GA+ +L EL+WREF  HLV   P+L +    
Sbjct: 243 SENLTYGEIGPATCWQA--GQRALAEGKAGAETFLKELVWREFAYHLVWHTPHLIEKNWR 300

Query: 300 VEWGARLEWWNDNEKFQLWCEGKTGYPIVDAAMRQLNQTGWMHNRLRMIVASFLTKDLHI 359
            EW     W +DN   + W  G+TG   VDAAMR++  TG MHNR RMIVAS+LTK L  
Sbjct: 301 AEWD-HFPWRDDNADAETWRRGRTGIRFVDAAMREMYVTGTMHNRGRMIVASYLTKHLMT 359

Query: 360 DWRWGERYFMSRLIDGDYAANNGGWQWCASTGCDGQPYFRIFNPVSQGEKFDPNGDFIRR 419
            WR G+ +F   L+D D A+N  GWQW A +G D  PYFR+FNP +Q +KFD +  + RR
Sbjct: 360 HWRVGQAWFDDCLVDWDPASNAMGWQWAAGSGPDAAPYFRVFNPDTQLDKFDRDQSYQRR 419

Query: 420 WVPELRSV----SSAYIHQ-PWTYPAVNSVLYPARLVDHKQEREVTLRLYKTAK 468
           ++ E +      + AY    P ++       YP  +V   + R+  L  Y+  K
Sbjct: 420 FIAEGQGTPPEDARAYFDAIPRSWGLSPDDAYPDPIVPLDEGRKRALDAYQARK 473