Pairwise Alignments

Query, 469 a.a., deoxyribodipyrimidine photo-lyase from Vibrio cholerae E7946 ATCC 55056

Subject, 499 a.a., deoxyribodipyrimidine photo-lyase from Burkholderia phytofirmans PsJN

 Score =  331 bits (849), Expect = 3e-95
 Identities = 208/488 (42%), Positives = 262/488 (53%), Gaps = 37/488 (7%)

Query: 3   LVWFRRDLRSFDNTALTAALNSGDPVAAMYIATP-------EQWHQHHLAPIQAD----L 51
           LVWFRRDLRS DN AL  AL   + V  +++          E W   H      D    L
Sbjct: 15  LVWFRRDLRSTDNAALYYALKHCERVWCVFVFDTTILQPLVEAWQARHPDTQPQDRRIEL 74

Query: 52  IWRRLAELQQELAALNVPLF--YQQVADFQAAAVAVSQLAKTLNATQVLANRDYELDEQQ 109
           I   L EL + L A    L   Y   AD       V +LA  L    V AN DYE     
Sbjct: 75  ILGALGELDEALRANGGGLIVLYGDPADL------VPKLADELGVDAVFANHDYEPVAIA 128

Query: 110 RDQLAQQLLSEQGIIWSAFDDKCVLPPGSVRTKQGEFFKVFTPFKRAWL---TLFQ-PPV 165
           RD+  ++ L+E G  W  F D+ +     V T Q + F VFTP+K AWL   T F   P 
Sbjct: 129 RDETVRETLAEAGRQWLTFKDQVIFERDEVLTGQNKPFTVFTPYKNAWLKQLTAFDLKPY 188

Query: 166 IGKNRPVALWNVPSALAELVWHPEQ-AFDYPRIDSTPWAADFETVRAQLRDFCRERVQDY 224
             ++    L   PS L   +   +Q  F    +      A     +  L DF   R+  Y
Sbjct: 189 PVESYTKHLAAPPSKLDRRLPTLDQLGFAPSNLAELDLPAGMSGAQRLLDDFAT-RIDSY 247

Query: 225 HQARDFPAREGTSSLSPYLAIGVLSARQCVARLYHESSMGELSEGAQVWLSELIWREFYQ 284
              RDFPA +G S LS +L  G +S R  +ARL HE S+    EG+  WLSELIWR+FY 
Sbjct: 248 KDRRDFPAAKGPSYLSIHLRFGTVSIRT-LARLAHEMSLQPDGEGSTTWLSELIWRDFYF 306

Query: 285 HLVAIEPNLSKSRDFVEWGARLEWWND---NEKFQLWCEGKTGYPIVDAAMRQLNQTGWM 341
            ++A  P L+    F E   +L W      +E F  WC+G+TGYP+VDAAM QLN+TG+M
Sbjct: 307 MILAHHPRLANGASFKEEYDQLRWEQGPEADEAFAAWCDGRTGYPLVDAAMLQLNRTGYM 366

Query: 342 HNRLRMIVASFLTKDLHIDWRWGERYFMSRLIDGDYAANNGGWQWCASTGCDGQPYFRIF 401
           HNRLRM+ ASFL KDL +DWR GERYF  +L D D++ANNGGWQW ASTGCD QPYFRIF
Sbjct: 367 HNRLRMVTASFLVKDLGVDWRLGERYFAQQLNDFDFSANNGGWQWAASTGCDAQPYFRIF 426

Query: 402 NPVSQGEKFDPNGDFIRRWVPELRSVSSAYIHQPW--------TYPAVNSVLYPARLVDH 453
           NP++Q EKFD  G FI+R++P+L  + S +IH PW         +  V    YPA +VDH
Sbjct: 427 NPITQSEKFDAEGRFIKRYLPQLARLPSKWIHAPWLAGTERLAEFGVVLGKDYPAPIVDH 486

Query: 454 KQEREVTL 461
            + R  TL
Sbjct: 487 AEARARTL 494