Pairwise Alignments

Query, 265 a.a., helix-turn-helix-type transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 315 a.a., Transcriptional regulator, MerR family, associated with photolyase from Pseudomonas fluorescens FW300-N2E2

 Score = 84.3 bits (207), Expect = 3e-21
 Identities = 57/189 (30%), Positives = 86/189 (45%), Gaps = 2/189 (1%)

Query: 10  IREVAEITGVKPVTLRAWQRRYNLVQPDRTEKGHRLFTDQDIEMIRQIQSWLAKGVAIGK 69
           IREVA  TGV  VTLRAW+RRY L+ P RT KGHRLF    ++ I  I +W+ +GVA+ K
Sbjct: 28  IREVARQTGVNAVTLRAWERRYGLIVPHRTPKGHRLFNADHVQRILSILTWIDRGVAVSK 87

Query: 70  VGALLQSGVSESESIPQPVGQLE-ECETLLTALAALQRSKAEQIIATVLKEYPLSVMQAQ 128
           +  LL +    +E    P    + +   L+ A+  L   + + ++   +  YP   +  Q
Sbjct: 88  IKPLLDTPQPPTEPTQVPENDWQRQRHALVLAVTQLAERQIDDLVNQAMALYPPWTVCEQ 147

Query: 129 FVQPVTEALE-RVKGPLRSLQIGLFRTLMLSKLAFILDAENKAAVKGKCLCISLDEAGSL 187
            + P+   L  R +G   +    +F    L          N   ++G  L +        
Sbjct: 148 LLLPLLAELHLRWQGQFGAQLERVFLYSWLRSKFGSRIYHNNRQLRGAPLLLVNHSDSPQ 207

Query: 188 NAWLWALAW 196
              LW  AW
Sbjct: 208 EPHLWLTAW 216