Pairwise Alignments

Query, 265 a.a., helix-turn-helix-type transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 315 a.a., Predicted transcriptional regulators from Pseudomonas stutzeri RCH2

 Score =  103 bits (258), Expect = 3e-27
 Identities = 70/195 (35%), Positives = 106/195 (54%), Gaps = 15/195 (7%)

Query: 5   EKRYAIREVAEITGVKPVTLRAWQRRYNLVQPDRTEKGHRLFTDQDIEMIRQIQSWLAKG 64
           ++ + IREV+ +TGV PVTLRAW+RRY L++P RT+ GHRL++  D+E +R I SW  +G
Sbjct: 18  QELFPIREVSRLTGVNPVTLRAWERRYGLIRPTRTDSGHRLYSMADVEAVRSILSWTERG 77

Query: 65  VAIGKVGALLQSGVSESESIPQPV----GQLEECE-TLLTALAALQRSKAEQIIATVLKE 119
           VA+ KVG++L    +  E+  +PV    G+  E +  L  A+      + EQ+   V   
Sbjct: 78  VAVSKVGSILARSAATREA-EEPVATVSGEWGEWQGQLREAVNGFDEVRLEQLYGQVFST 136

Query: 120 YPLSVMQAQFVQPVTEAL----ERVKGPLRSLQIGLF---RTLMLSKLAFILDAEN--KA 170
           YPL+V+    + PV + L    +   G    L +  F   R L   +LA +   E    A
Sbjct: 137 YPLAVVFQDVLLPVWQELLLRQDEFGGTSEWLFLDAFLRARALQRLQLARMPAGERVLLA 196

Query: 171 AVKGKCLCISLDEAG 185
           A+ G+C  + L  AG
Sbjct: 197 AMPGQCRELELLVAG 211