Pairwise Alignments

Query, 265 a.a., helix-turn-helix-type transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 243 a.a., helix-turn-helix-type transcriptional regulator from Klebsiella michiganensis M5al

 Score =  108 bits (269), Expect = 1e-28
 Identities = 77/243 (31%), Positives = 123/243 (50%), Gaps = 13/243 (5%)

Query: 8   YAIREVAEITGVKPVTLRAWQRRYNLVQPDRTEKGHRLFTDQDIEMIRQIQSWLAKGVAI 67
           Y+I EVAE  G+ PVTLRAWQRRY L++P R+E GHR F ++D++ I +I+ W+ +GV++
Sbjct: 4   YSIGEVAERCGINPVTLRAWQRRYGLLKPQRSEGGHRQFDEEDVQRIEEIKRWIDRGVSV 63

Query: 68  GKVGALLQSGVSESESIPQPVGQLEECETLLTALAALQRSKAEQIIATVLKEYPLSVMQA 127
           GKV ALL+    ES      +      E +++ L  +Q +K    I ++  EYP+  +  
Sbjct: 64  GKVKALLEGQQPESHDAAVLLQ-----EEMMSLLRLVQPAKLRTRIMSLSHEYPVDKLID 118

Query: 128 QFVQPVTEALERVKGPLRSLQIGLFRTLMLSKLAFILDAENKAAVKGKCLCISLDEAGSL 187
           +   PV   L   +    ++ I +   +++  +A IL AE++  V  + L +        
Sbjct: 119 RLFVPVRSKLNLDQNTSLAI-ISMLDGILIDCVALIL-AESRKKVGKETLLVGWGNEDRT 176

Query: 188 NAWLWALAWAENGHQVTLL-EAVDDIRGLLENPGLAQYQILALHAHRALPAAQQSALASL 246
             WL A   ++    V +L E +D  R     P L   Q + +   RAL   Q   L+  
Sbjct: 177 RLWLEAWRLSQRAWHVNVLAEPLDSPR-----PELFPGQHIFVWTGRALTPLQAELLSHW 231

Query: 247 QQQ 249
           Q Q
Sbjct: 232 QSQ 234