Pairwise Alignments

Query, 526 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 393 a.a., GGDEF family protein (RefSeq) from Shewanella amazonensis SB2B

 Score = 93.6 bits (231), Expect = 1e-23
 Identities = 62/158 (39%), Positives = 85/158 (53%), Gaps = 9/158 (5%)

Query: 372 DPLTKLHNRRWLDVKLKDLLLH----ETPFAFLVVDIDHFKSINDELSHLVGDKAIVNVS 427
           D LT L NRR  +++L++L L       PFA +++D+DHFK IND+L H  GD A+   +
Sbjct: 229 DMLTGLWNRRSAELRLRELNLRWQKGREPFAIVLLDLDHFKKINDKLGHQAGDAALRQAA 288

Query: 428 SELASYFKFRGASCVRFGGEEFLVILENVTSDMAQMHAETYRQRI--FDFPWQDVLGERG 485
             L+   +     C RFGGEEFLVIL  V    A + AE  R+ +      W D   E  
Sbjct: 289 LILSHSLRETDMLC-RFGGEEFLVILSGVGIKQAHLVAEKLRESLAATALRWDD--DEVV 345

Query: 486 LTVSIGITLHREGENTQRTFYRADKALYRAKANGRNQV 523
           L+ S G     +G +  +    AD A+Y+AKA GRN V
Sbjct: 346 LSASFGCAAMVDGMSVSQLISAADHAMYQAKAGGRNCV 383