Pairwise Alignments

Query, 526 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 356 a.a., GGDEF domain-containing protein (RefSeq) from Shewanella amazonensis SB2B

 Score = 89.4 bits (220), Expect = 2e-22
 Identities = 66/173 (38%), Positives = 93/173 (53%), Gaps = 10/173 (5%)

Query: 358 QKNTVLQLQQDVFTDPLTKLHNRRWLDVKLKDLLLHETPFAFLVVDIDHFKSINDELSHL 417
           Q ++++Q+ Q    DPLT L NR  L++ L   L   T    +++D+DHFK IND   H 
Sbjct: 156 QHDSLVQIAQ---RDPLTGLFNRSKLELDLA-ALAPATQAILMLLDVDHFKRINDVHGHQ 211

Query: 418 VGDKAIVNVSSELASYFKFRGASCVRFGGEEFLVILE----NVTSDMAQMHAETYRQRI- 472
           +GDK + ++   L +      A+  RFGGEEFLV+      +  ++ A   A+T   R  
Sbjct: 212 MGDKVLTSLGKLLDALLP-DVATAYRFGGEEFLVLFNLTEPSAFNETALNLAKTTAGRFQ 270

Query: 473 FDFPWQDVLGERGLTVSIGITLHREGENTQRTFYRADKALYRAKANGRNQVCV 525
                 DV+    +T SIGI     GE+    F RAD ALYRAK +GR+QVCV
Sbjct: 271 AALRCVDVVPGSTITCSIGIAQRIAGEHIPPWFDRADAALYRAKRSGRDQVCV 323