Pairwise Alignments

Query, 526 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 622 a.a., diguanylate cyclase (RefSeq) from Shewanella loihica PV-4

 Score =  105 bits (263), Expect = 4e-27
 Identities = 80/228 (35%), Positives = 117/228 (51%), Gaps = 31/228 (13%)

Query: 306 KKAFRIESDLMKRIPISELGPIQLRRLSRFELQLKLILSELENRELKETTESQKNTVLQL 365
           ++A +IE+D  +R+          + +    L+L++ L EL     K T   ++NTV   
Sbjct: 411 EEALQIEADSNERLE---------QMVQERTLELEIALRELNEANQKLT---EQNTV--- 455

Query: 366 QQDVFTDPLTKLHNRRWLDVKLKD----LLLHETPFAFLVVDIDHFKSINDELSHLVGDK 421
                 D LT + NR   + +L+         +TP A L++DID FK+IND   HL GD+
Sbjct: 456 ------DSLTGVKNRAAFEKRLQAEGRLSRRQQTPLAILMIDIDRFKAINDTYGHLAGDQ 509

Query: 422 AIVNVSSELASYFKFRGASCVRFGGEEFLVILENVTSDMAQMHAETYRQRIFDFPWQDVL 481
           A+  ++  L    +       RFGGEEF +IL N + D A   AE  R  + + P     
Sbjct: 510 ALKTIAQALKEKLRRPSDLVSRFGGEEFAMILPNTSCDGALQVAELMRSTVSELPL--AW 567

Query: 482 GERG--LTVSIGITLH--REGENTQRTFYRADKALYRAKANGRNQVCV 525
           GE+   LT+SIGI      + ++TQ    +ADKALYRAK  GRN+VCV
Sbjct: 568 GEQAIPLTISIGICAEVIVDDQHTQLLVDQADKALYRAKHEGRNRVCV 615