Pairwise Alignments

Query, 526 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 347 a.a., diguanylate cyclase (RefSeq) from Shewanella loihica PV-4

 Score = 90.9 bits (224), Expect = 7e-23
 Identities = 69/197 (35%), Positives = 100/197 (50%), Gaps = 24/197 (12%)

Query: 346 LENRELKETTESQKNTVLQLQQD-------VFTDPLTKLHNRRWLDVKLKDLLLHETPF- 397
           + NR+++   ++    V  L+ +       V TD LT L NRR  D   +++L H   F 
Sbjct: 154 ISNRQMEANLKTMNQEVAALKAEMEDLNIAVMTDQLTSLRNRRAFD---EEVLGHIQRFR 210

Query: 398 ------AFLVVDIDHFKSINDELSHLVGDKAIVNVSSELASYFKFRGASCV-RFGGEEFL 450
                 + L+VDID+FK  ND   HLVGDK +  ++  L    K  G   V R+GGEEF+
Sbjct: 211 REQRLSSLLLVDIDNFKQFNDTHGHLVGDKVLAYIALALKQGVK--GDDFVARYGGEEFV 268

Query: 451 VILENVTSDMAQMHAETYRQRIFD----FPWQDVLGERGLTVSIGITLHREGENTQRTFY 506
           ++L +     A + AE  R RI +          L    +TVSIG+   R  ++ +    
Sbjct: 269 ILLPDTEHSGAMVVAEQLRARIAERHLSIGKDKKLSLGAITVSIGVATLRLDDDRESYLV 328

Query: 507 RADKALYRAKANGRNQV 523
           RAD+ALYRAK+ GRN V
Sbjct: 329 RADEALYRAKSAGRNCV 345