Pairwise Alignments

Query, 526 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 496 a.a., diguanylate cyclase with PAS/PAC sensor (RefSeq) from Shewanella loihica PV-4

 Score = 97.1 bits (240), Expect = 1e-24
 Identities = 60/173 (34%), Positives = 96/173 (55%), Gaps = 18/173 (10%)

Query: 363 LQLQQDVFTDPLTKLHNRRWLDVKLKDLLLH----ETPFAFLVVDIDHFKSINDELSHLV 418
           +Q +    TDPLTK+ NRR ++ +L   +      +TP A  + DIDHFK++ND+  HLV
Sbjct: 331 MQYKSQANTDPLTKVANRRAINRQLAAAISRSNRQQTPLAVCIFDIDHFKAVNDKHGHLV 390

Query: 419 GDKAIVNVSSELASYFKFRGASCVRFGGEEFLVILENVTSDMAQMHAETYRQRI------ 472
           GD  +  V+   +   + +     R+GGEEF++ILE+   + A+  A+  RQ +      
Sbjct: 391 GDDVLQRVAKIFSDAIR-KTDFVGRWGGEEFVIILEDTDKEGAKHFADKLRQEVKRRSQG 449

Query: 473 FDFPWQDVLGERGLTVSIGITLHREGENTQRTFYRADKALYRAKANGRNQVCV 525
            DFP         +T+S G++++ + +     F  AD+ALYRAK +GR+ V V
Sbjct: 450 IDFP-------VAITLSAGVSVYCQDDKQDCLFNHADQALYRAKESGRDCVVV 495