Pairwise Alignments

Query, 526 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 837 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) (RefSeq) from Shewanella loihica PV-4

 Score = 98.2 bits (243), Expect = 1e-24
 Identities = 63/171 (36%), Positives = 92/171 (53%), Gaps = 7/171 (4%)

Query: 357 SQKNTVLQLQQDVFTDPLTKLHNRRWLDVKLKDLLLH----ETPFAFLVVDIDHFKSIND 412
           +QK +  +L + V+ DPLTKL NR  L   L+  L H    ET  A + +D+D FK IND
Sbjct: 401 AQKQSEKELARLVYHDPLTKLPNRMMLSANLEQELRHAAREETELALIFIDVDLFKHIND 460

Query: 413 ELSHLVGDKAIVNVSSELASYFKFRGASCVRFGGEEFLVILENVTSDMAQMHAETYRQRI 472
              H+ GD  +V V+  L        A+  R G +EF+ +L +V SD +     +  +  
Sbjct: 461 SYGHVTGDAILVEVARRLGQKLG-EEATLARLGSDEFIAVLPHVESDDSVSLMVSRLREA 519

Query: 473 FDFPW-QDVLGERGLTVSIGITLH-REGENTQRTFYRADKALYRAKANGRN 521
           FD P+  D  G   LT S+G+ ++  +GE+       AD A++RAKANGRN
Sbjct: 520 FDAPFLLDDEGSVRLTASMGVAIYPGDGESGDTLLRNADTAMHRAKANGRN 570