Pairwise Alignments

Query, 526 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 518 a.a., GGDEF domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 91.7 bits (226), Expect = 6e-23
 Identities = 63/186 (33%), Positives = 98/186 (52%), Gaps = 9/186 (4%)

Query: 347 ENRELKETTESQKNTVLQLQQDVFTDPLTKLHNRRWLDVKL----KDLLLHETPFAFLVV 402
           E  EL     + K  + + Q+    D LT+L NR  L+ ++    ++   H++P    V 
Sbjct: 335 ELNELSNEANTYKERLFEQQKLNLLDSLTQLPNRAALEERMELEYRNYQRHKSPLWIAVA 394

Query: 403 DIDHFKSINDELSHLVGDKAIVNVSSELASYFKFRGASCV-RFGGEEFLVILENV-TSDM 460
           DIDHFK IND   H  GDK +  ++  L +    R    V R+GGEEF++IL ++  SD+
Sbjct: 395 DIDHFKIINDSFGHSTGDKTLQVIAMALKN--SLRDTEFVARYGGEEFVLILPDIDDSDI 452

Query: 461 AQMHAETYRQRIFDFPWQDVLGERGLTVSIGITLHREGENTQRTFYRADKALYRAKANGR 520
           AQ+     R+++ + P++       +TVSIG       E    TF RAD ALY+AK   R
Sbjct: 453 AQL-LNRVREKVKNIPFKFKNQRITVTVSIGAARVMGNELIHETFERADAALYKAKHESR 511

Query: 521 NQVCVE 526
           ++V ++
Sbjct: 512 DRVVID 517