Pairwise Alignments

Query, 526 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 489 a.a., GGDEF domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 95.9 bits (237), Expect = 3e-24
 Identities = 62/184 (33%), Positives = 95/184 (51%), Gaps = 8/184 (4%)

Query: 347 ENRELKETTESQKNTVLQLQQDVFTDPLTKLHNRRWLDVKL----KDLLLHETPFAFLVV 402
           +N +L+      ++T  +L+     DPLTKL+NR + + +     +  +  E     +++
Sbjct: 306 KNEQLEALRLRLEHTNAELEFLSTHDPLTKLYNRHYFNRQFVHEHRSEISSEGAICLVML 365

Query: 403 DIDHFKSINDELSHLVGDKAIVNVSSELASYFKFRGASCVRFGGEEFLVILENVTSDMAQ 462
           DID FK IND L H VGD  ++ +S  L    +       R+GGEEF+++    + D+ +
Sbjct: 366 DIDFFKEINDTLGHAVGDNILMELSGVLQHCVRETDV-VARWGGEEFVILCHQTSIDLVK 424

Query: 463 MHAETYRQRIFDFPWQDVLGERGLTVSIGITLHREGENTQRTFYRADKALYRAKANGRNQ 522
              +     I D+ +    G   LT S GI      E  Q  F RADKALY+AKA GRNQ
Sbjct: 425 TLCQRIAAAIKDYRFS---GNVQLTCSFGIAKLVNNEPMQSCFERADKALYQAKALGRNQ 481

Query: 523 VCVE 526
           +CV+
Sbjct: 482 ICVD 485