Pairwise Alignments

Query, 526 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 625 a.a., diguanylate cyclase (RefSeq) from Shewanella sp. ANA-3

 Score = 99.8 bits (247), Expect = 3e-25
 Identities = 78/233 (33%), Positives = 117/233 (50%), Gaps = 24/233 (10%)

Query: 306 KKAFRIESDLMK-----RIPISELGPIQLRRLSRFE--LQLKLILSELENRELKETTESQ 358
           K   RI+ + +K     R    E   ++     R E  +Q + +  E+  REL E  +  
Sbjct: 391 KSKLRIQQEALKQAQKIRSAREEALKVEAETNERLEQMVQERTLELEITLRELHEVNQ-- 448

Query: 359 KNTVLQLQQDVFTDPLTKLHNRRWLDVKL----KDLLLHETPFAFLVVDIDHFKSINDEL 414
                +L +    D LT + NR   D +L    +     ETP A L++DID FKSIND+ 
Sbjct: 449 -----KLTEQSTIDSLTGVKNRSAFDKRLLAESRISRRQETPIALLMLDIDRFKSINDQF 503

Query: 415 SHLVGDKAIVNVSSELASYFKFRGASCVRFGGEEFLVILENVTSDMAQMHAETYRQRI-- 472
            HL GD+A+  +++ L  + K       RFGGEEF +IL N T++ A   AE+ R  +  
Sbjct: 504 GHLAGDQALKVIATTLQQHLKRPTDLVSRFGGEEFAIILPNTTAEGAIQVAESIRDAVTS 563

Query: 473 FDFPWQDVLGERGLTVSIGIT--LHREGENTQRTFYRADKALYRAKANGRNQV 523
               W+       LTVSIG++  +    +++     +ADKALY+AK +GRNQV
Sbjct: 564 IGLAWEG--KPIPLTVSIGVSADVISNDQHSTELLEQADKALYQAKNSGRNQV 614