Pairwise Alignments

Query, 376 a.a., HlyD family secretion protein from Vibrio cholerae E7946 ATCC 55056

Subject, 390 a.a., Secretion protein HlyD (NCBI) from Rhodospirillum rubrum S1H

 Score = 80.9 bits (198), Expect = 6e-20
 Identities = 74/251 (29%), Positives = 116/251 (46%), Gaps = 20/251 (7%)

Query: 64  TPIVSGVRGRVVEVPVKPNQPLTQGDVLFRIDPIPF--EADVARLKAKVKEASQGAL--- 118
           T I   V G V EV V  N+ ++ G +L R+D   +  + D AR  A+ K A   ++   
Sbjct: 70  TAIAPKVSGYVDEVAVGDNEVVSAGQLLVRLDSADYRVQVDQARANAEGKAAELASIIAN 129

Query: 119 -GLEST-LKEAQAAVLKAIAERDKAQREYDRYQRGYQRGAFTEQQMDTTRQ-------TY 169
             L+ T + +A+ A+  A A  D+A ++  RYQ    RGA + Q +D+ R+         
Sbjct: 130 IDLQQTAIAQARGAMDAAQARFDRAAKDLARYQDLVGRGATSRQSLDSAREQATSGAAEL 189

Query: 170 KAAQAALEVAQSKQEQAQIALDSEVGGENTTVAQLLAELRKAEFDLEQTIVRAPTDGYVT 229
           ++A AAL+ AQ +   A ++ D +        AQ  A+   AE +L  T +RAP  G V 
Sbjct: 190 RSAAAALDGAQKR--LAVLSADRDAAAAEVRSAQ--AQRALAEINLANTEIRAPIAGVVG 245

Query: 230 QLALRPGMMSVPLPLAPVMTFVHTEEKIYTAAFRQNSLQRLQPGFAAEFMFRALPGKVFK 289
              +R G      P + +M  V  E     A F++  L  + PG   +    A  G+  +
Sbjct: 246 NRGVRAGQYVA--PGSALMAIVPLEGLWIAANFKETQLGAMAPGQTVKVEIDAYSGRHGQ 303

Query: 290 GEVIEVLPAIG 300
           G V+   PA G
Sbjct: 304 GRVVSFAPASG 314