Pairwise Alignments

Query, 376 a.a., HlyD family secretion protein from Vibrio cholerae E7946 ATCC 55056

Subject, 359 a.a., secretion protein HlyD from Pedobacter sp. GW460-11-11-14-LB5

 Score = 86.3 bits (212), Expect = 1e-21
 Identities = 76/311 (24%), Positives = 141/311 (45%), Gaps = 37/311 (11%)

Query: 33  VLGGVILIGTLILLMNYN----HPFTQLGSQVYSTTPIVSGVRGRVVEVPVKPNQPLTQG 88
           +LG +++IG +  +  +N    H  T         +P+V+ V G V ++  + N  +T+G
Sbjct: 15  ILGVLLVIGIIFGITEWNYYSKHVDTDDAQIDGDISPVVARVGGYVKDINFEENTHVTEG 74

Query: 89  DVLFRIDPIPFEADVARLKAKVKEASQGALGLESTLKEAQAAVLKAIAERDKA------- 141
            +L ++D   ++  + + ++  K AS G    ES +   QA    A A  D A       
Sbjct: 75  QILVKLDDNDYKVKLEQAQSGQKGASAGVGVAESQIVATQANTGTAKANVDAAKSNVQAA 134

Query: 142 -------QREYDRYQRGYQRGAFTEQQMDTTRQTYKAAQAALEVAQSKQEQAQIALDSEV 194
                  Q++Y+RY+   + G+ T+Q  D  +   ++A+AA + A +    AQ   ++ V
Sbjct: 135 NVKVNLAQKDYNRYENLVKDGSITQQAFDQAKANKESAEAARQSALAAYRAAQDQYNAAV 194

Query: 195 GGENTTVAQLL----------AELRKAEFDLEQTIVRAPTDGYVTQLALRPGMMSVPLPL 244
               TT +QL           +++  A+  L  T ++AP  G V++  ++ G +   +  
Sbjct: 195 KQVGTTQSQLAVSSNVISQRQSDIDFAKLQLSYTDIKAPATGIVSKKNVQKGQL---VQA 251

Query: 245 APVMTFVHTEEKIY-TAAFRQNSLQRLQPGFAAEFMFRALPGKVFKGEVIEVLPAIGESQ 303
              +  +  +  IY TA F++  L++++ G   E    A P +   GEV    P  G   
Sbjct: 252 GQSLFSIVNDGSIYVTANFKETQLEKIKEGSKVEIEVDAYPDEKIHGEVYNFSPITG--- 308

Query: 304 IQARGALLGTD 314
             A+G+LL  D
Sbjct: 309 --AKGSLLPPD 317