Pairwise Alignments

Query, 376 a.a., HlyD family secretion protein from Vibrio cholerae E7946 ATCC 55056

Subject, 378 a.a., secretion protein HlyD from Klebsiella michiganensis M5al

 Score =  337 bits (865), Expect = 2e-97
 Identities = 175/378 (46%), Positives = 243/378 (64%), Gaps = 2/378 (0%)

Query: 1   MDLLLILTYTALCVAVFKVFKIPLNKWTVPTAVLGGVILIGTLILLMNYNHPFTQLGSQV 60
           MDLL+ILTY A+  ++FK+FKIP+NKWTVPTA LGGV ++  LILLMNYNHP+T    + 
Sbjct: 1   MDLLIILTYVAIAWSIFKIFKIPVNKWTVPTAALGGVFIVSALILLMNYNHPYTFTAQKA 60

Query: 61  YSTTPIVSGVRGRVVEVPVKPNQPLTQGDVLFRIDPIPFEADVARLKAKVKEASQGALGL 120
             + PI   V G V  V  K NQ + +G+VLF IDP  ++A V RL+A +  A      L
Sbjct: 61  VISIPITPQVTGVVSSVTDKANQRVKKGEVLFTIDPARYQARVDRLQADLVTALHSINTL 120

Query: 121 ESTLKEAQAAVLKAIAERDKAQREYDRYQRGYQR--GAFTEQQMDTTRQTYKAAQAALEV 178
           ++ L EAQA   +  AERD+  ++Y RY +G Q     F+E  +D  RQ Y A  A ++ 
Sbjct: 121 KAQLSEAQANTTRVSAERDRLYKDYQRYLKGSQARVNPFSESDIDNARQNYLAQDAMVKG 180

Query: 179 AQSKQEQAQIALDSEVGGENTTVAQLLAELRKAEFDLEQTIVRAPTDGYVTQLALRPGMM 238
           + ++Q Q Q  LDS + GE + V  L A+L +A+++L+QT VRAP+DGY+TQ+ +RPG  
Sbjct: 181 SVAEQAQIQSQLDSIINGEQSQVVSLRAQLAEAKYNLDQTTVRAPSDGYITQVLIRPGTY 240

Query: 239 SVPLPLAPVMTFVHTEEKIYTAAFRQNSLQRLQPGFAAEFMFRALPGKVFKGEVIEVLPA 298
           +  LPL PVM F+  ++++  A FRQNSL RL+ G  AE +F ALPG+VF+G+++ +LP 
Sbjct: 241 AASLPLRPVMVFIPQQKRLIVAQFRQNSLLRLEKGDDAEAVFNALPGQVFRGKLVSILPV 300

Query: 299 IGESQIQARGALLGTDALRTSGRVFVTLRITDDLSQYHLPMGSAVEVAVYSDSFEHVSIM 358
           +     QA+G L        +  V  T+ +  D +   LP G   +VAVYSD F HVS+M
Sbjct: 301 VPGGTYQAQGTLQALTVTPGTDGVLATIELEPDAAVDALPDGIYAQVAVYSDHFTHVSVM 360

Query: 359 RKVLIRMKSWQNYLYLDH 376
           RKVL+RM SW +YLYLDH
Sbjct: 361 RKVLLRMTSWMHYLYLDH 378