Pairwise Alignments

Query, 376 a.a., HlyD family secretion protein from Vibrio cholerae E7946 ATCC 55056

Subject, 342 a.a., multidrug transporter subunit MdtN from Klebsiella michiganensis M5al

 Score =  111 bits (277), Expect = 3e-29
 Identities = 88/280 (31%), Positives = 137/280 (48%), Gaps = 17/280 (6%)

Query: 26  KWTVPTAVLGGVILIGTLILLMNYNHPFTQLGSQVYSTTPIVSGVRGRVVEVPVKPNQPL 85
           KW +   VL  ++ +  +I  +  + P T        T  +V  V GR+VE+P++ NQ +
Sbjct: 12  KWPLLALVLAAIVALIVVIWQLQTS-PETNDAYVYADTIDVVPEVSGRIVEMPIRDNQRV 70

Query: 86  TQGDVLFRIDPIPFEADVARLKAKVKEASQGALGLESTLK--EAQAAVLKAIAERDKAQR 143
            +GD+LFRIDP P++A +   KA++       +  + T+K  E  A  + A  ER KA  
Sbjct: 71  KKGDLLFRIDPRPYQAMLDDAKARLTTLDAQIMLTQRTIKAQEYNAQSVSAAVERAKALV 130

Query: 144 EYD-----RYQRGYQRGAFTEQQMDTTRQTYKAAQAALEVAQSKQEQAQIALDSEVGGEN 198
           +       R +    +G  +++ +D  R   KAA+A LE    + +QA  A    V G +
Sbjct: 131 KQTTSSRIRLEPLVPQGFASQEDLDQARTAEKAARAELEATLLQAKQASAA----VTGVD 186

Query: 199 TTVAQ---LLAELRKAEFDLEQTIVRAPTDGYVTQLALRPGMMSVPLPLAPVMTFVHTEE 255
             VAQ   +LA++  AE  LE T VRAP +G V  +AL+  +      L PV T +  + 
Sbjct: 187 AMVAQRAGILAQIALAELHLEFTEVRAPFNGVV--VALKTTIGQYASALKPVFTLLDDDH 244

Query: 256 KIYTAAFRQNSLQRLQPGFAAEFMFRALPGKVFKGEVIEV 295
               A FR+  LQ ++PG  A        G+ F+G V  V
Sbjct: 245 WYVVANFRETDLQNVRPGVPARITVMTNHGRTFEGVVDSV 284