Pairwise Alignments

Query, 376 a.a., HlyD family secretion protein from Vibrio cholerae E7946 ATCC 55056

Subject, 298 a.a., auxiliary transporter membrane fusion protein from Klebsiella michiganensis M5al

 Score = 78.6 bits (192), Expect = 2e-19
 Identities = 69/269 (25%), Positives = 122/269 (45%), Gaps = 38/269 (14%)

Query: 45  LLMNY--NHPFTQLGSQVYSTTPIVSGVRGRVVEVPVKPNQPLTQGDVLFRIDPIPFEAD 102
           L+ NY    P+T+ G        +   V G ++++ V+ NQ +  G+VLFRID  P++  
Sbjct: 22  LVWNYYTQSPWTRDGKVRAEQVGVTPQVSGSILQLNVRDNQLVKAGEVLFRIDDTPYK-- 79

Query: 103 VARLKAKVKEASQGALGLESTLKEAQAAVLKAIAERDKAQREYDRYQRGYQRGAFTEQQM 162
           +A L A+ +            L +A+A V +A AE+ KA  + +R +R   +   + + +
Sbjct: 80  IALLNARAQ------------LAKAKAEVARAQAEQKKAASDANR-RRHLSQNFISAEDL 126

Query: 163 DTTRQTYKAAQAALEVAQSKQEQAQIALDSEVGGENTTVAQLLAELRKAEFDLEQTIVRA 222
           +        A   LE A++    AQ  LD                   A++ L QT ++A
Sbjct: 127 ENANTALNTATTNLEAAKAVVGVAQATLD------------------HAQWQLTQTEIKA 168

Query: 223 PTDGYVTQLALRPGMMSVPLPLAPVMTFVHTEEKIYTAAFRQNSLQRLQPGFAAEFMFRA 282
           P DG+VT L+ R G         PV   V +        F +  L+ ++PG +A+ +  +
Sbjct: 169 PVDGWVTNLSTRVG--DYAAVGHPVFALVDSHSFYVVGYFEETKLRHIRPGDSAQIILYS 226

Query: 283 LPGKVFKGEVIEVLPAIGESQIQARGALL 311
              K+ +G V  +  AI +  +++ G L+
Sbjct: 227 SKQKL-QGHVGSIGRAIVDQSVESSGGLV 254