Pairwise Alignments

Query, 376 a.a., HlyD family secretion protein from Vibrio cholerae E7946 ATCC 55056

Subject, 361 a.a., multidrug transporter EmrA from Klebsiella michiganensis M5al

 Score = 82.4 bits (202), Expect = 2e-20
 Identities = 74/279 (26%), Positives = 128/279 (45%), Gaps = 20/279 (7%)

Query: 39  LIGTLILLMNYN-HPFT---QLGSQVY---STTPIVSGVRGRVVEVPVKPNQPLTQGDVL 91
           ++G L++L  +   PFT   Q     Y    TT I   V G + EV V+    +  GDVL
Sbjct: 30  IVGVLVILYAWQLPPFTRESQFTDNAYVRGQTTFISPQVNGYITEVKVQDFNQVKAGDVL 89

Query: 92  FRIDPIPF-------EADVARLKAKVKEASQGALGLESTLKEAQAAVLKAIAERDKAQRE 144
           F+ID   +       +A +A  +A +K   Q     E+ +   +AA+  A A+  K Q +
Sbjct: 90  FQIDERIYKQRVHQAQATLAMKEAALKNNQQQRRSAEAVIARNEAALQNARAQNLKTQAD 149

Query: 145 YDRYQRGYQRGAFTEQQMDTTRQTYKAAQAALEVAQSKQEQAQIALDSEVGGENTTVAQL 204
             R Q     G+ + ++ D+ R +     A +E A++  E ++  L S +   ++ +A +
Sbjct: 150 LKRVQELTADGSLSIRERDSARASAAQGTADIEQAKATLEMSRQDLQSTIVNRDSLLADV 209

Query: 205 L---AELRKAEFDLEQTIVRAPTDGYVTQLALRPGMMSVPLPLAPVMTFVHTEEKIYTAA 261
               A L  A+ DL+ T + APTDG + Q+++R G     +     +T +   +    A 
Sbjct: 210 ASAKAALELAQIDLQNTRIIAPTDGQLGQISVRLGAY---VTAGTHLTSLVPPQHWLIAN 266

Query: 262 FRQNSLQRLQPGFAAEFMFRALPGKVFKGEVIEVLPAIG 300
            ++  L +++ G    F   AL  + F G V  + PA G
Sbjct: 267 LKETQLAQVRVGQRVTFTVDALNSEKFTGTVQSISPATG 305