Pairwise Alignments

Query, 376 a.a., HlyD family secretion protein from Vibrio cholerae E7946 ATCC 55056

Subject, 343 a.a., multidrug transporter subunit MdtN from Klebsiella michiganensis M5al

 Score =  100 bits (249), Expect = 6e-26
 Identities = 83/285 (29%), Positives = 131/285 (45%), Gaps = 17/285 (5%)

Query: 21  KIPLNKWTVPTAVLGGVILIGTLILLMNYNHPFTQLGSQVYSTTPIVSGVRGRVVEVPVK 80
           KIP NK      VL  V+++  +I  ++ + P T        T  +V  V GR+VE+ V 
Sbjct: 7   KIPRNKLPALLLVLLAVVVLLVVIWRLD-SAPATNDAYASADTIDVVPEVSGRIVELAVS 65

Query: 81  PNQPLTQGDVLFRIDPIPFEADVARLKAKVKEASQGALGLESTL-------KEAQAAVLK 133
            NQ + QGD+LFRIDP  +E ++A+ +A +    +  +  + ++          QA V K
Sbjct: 66  DNQQVKQGDLLFRIDPRTYEMNLAKAEASLAALDKQIMLTQRSVDAQKYGADSVQATVAK 125

Query: 134 AIAERDKAQREYDRYQRGYQRGAFTEQQMDTTRQTYKAAQAALEVAQSKQEQAQIALDSE 193
           A A   +A     R +   + G  + + +D  R   +AA A L     + +QA     S 
Sbjct: 126 ARAAAKQASDTLRRTEPLLKEGFVSAEDVDRARTAQRAAAADLNAVLLQAQQAA----SA 181

Query: 194 VGGENTTVAQLL---AELRKAEFDLEQTIVRAPTDGYVTQLALRPGMMSVPLPLAPVMTF 250
           V G +  VAQ +   A++   +  LE   VRAP DG V  +AL+  +      + P+ T 
Sbjct: 182 VSGIDALVAQRVAVEADIALTKLHLEMATVRAPFDGRV--VALKTSIGQFASAMRPLFTL 239

Query: 251 VHTEEKIYTAAFRQNSLQRLQPGFAAEFMFRALPGKVFKGEVIEV 295
           + T      A FR+  L+ +  G  A     +  GK F G+V  V
Sbjct: 240 IDTRHWYVIANFRETELKNIHTGTPATIRLMSDSGKTFAGKVDSV 284