Pairwise Alignments

Query, 376 a.a., HlyD family secretion protein from Vibrio cholerae E7946 ATCC 55056

Subject, 364 a.a., secretion protein HlyD family protein (RefSeq) from Shewanella sp. ANA-3

 Score =  101 bits (251), Expect = 4e-26
 Identities = 92/356 (25%), Positives = 172/356 (48%), Gaps = 20/356 (5%)

Query: 32  AVLGGVILIGTLILLMNYNHPFTQLGSQVYS---TTPIVSGVRGRVVEVPVKPNQPLTQG 88
           A LG + LI  L+L        T   SQ        PI + V G++++V V+ NQ + +G
Sbjct: 15  ATLGLLALIVILLLWYLVADRMTPYSSQARVQAFVVPIATEVTGQILKVYVQDNQDVAEG 74

Query: 89  DVLFRIDPIPFEADVARLKAKVKEASQGALGLESTLKEAQAAVLKAIAERDKAQREYDRY 148
             LF IDP P++  +A+ K+  +            +K A+A +    A  + + ++ +R 
Sbjct: 75  APLFDIDPEPYDIALAKAKSDYETVLNSVKANNEGVKAAEAKLQAMRASYNNSVKDAERQ 134

Query: 149 QRGYQR--GAFTEQQMDTTRQTYKAAQAALEVAQSKQEQAQIALDSEVGGENTTVAQLL- 205
           +R Y++  GA + ++++  + + + A + +  A++   +A  A  + V GEN   +QLL 
Sbjct: 135 ERLYRQDPGAISVRRLEIAQASRETASSQVTAAEADVRRAIEA--AGVNGENN--SQLLS 190

Query: 206 --AELRKAEFDLEQTIVRAPTDGYVTQLALRPGMMSVPLPLAPVMTFVHTEEKIYTAAFR 263
             + + KAE D + T V AP+ G +T L    G        AP MT +   +   +A   
Sbjct: 191 ARSAVNKAERDRQNTHVVAPSRGVITDLNTDVGQFI--NAGAPAMTLIAIHDVWISADLT 248

Query: 264 QNSLQRLQPGFAAEFMFRALPGKVFKGEVIEVLPAIGESQIQARGAL----LGTDALRTS 319
           +N+L  ++ G     +  ++PG++F G++  +   + + + QA G+L       D LR +
Sbjct: 249 ENNLGNIKVGNRVSILLDSMPGQLFSGQIRSIGYGVDDGKKQAVGSLPTVSNSRDWLRQA 308

Query: 320 GR--VFVTLRITDDLSQYHLPMGSAVEVAVYSDSFEHVSIMRKVLIRMKSWQNYLY 373
            R  V V+    D     +L +G   ++ VY++    ++ +  + IR+ S  +YLY
Sbjct: 309 QRFPVKVSFSADDMPPAANLRVGGQADILVYTEEHGLMNPLGALYIRVMSLFSYLY 364