Pairwise Alignments

Query, 376 a.a., HlyD family secretion protein from Vibrio cholerae E7946 ATCC 55056

Subject, 351 a.a., secretion protein HlyD family protein (RefSeq) from Shewanella sp. ANA-3

 Score = 67.8 bits (164), Expect = 4e-16
 Identities = 57/241 (23%), Positives = 109/241 (45%), Gaps = 12/241 (4%)

Query: 70  VRGRVVEVPVKPNQPLTQGDVLFRIDPIPFEADVARLKAKVKEASQGALGL-------ES 122
           V G VV   V  NQ + +G++L +++   F A V++ +A +  A      L        +
Sbjct: 50  VPGYVVLSDVTDNQHVRKGELLAQLEDNQFSAKVSQAEALLASAKADMQTLAAKVELQHA 109

Query: 123 TLKEAQAAVLKAIAERDKAQREYDRYQRGYQRGAFTEQQMDTTRQTYKAAQAALEVAQS- 181
            + +A A V+ A A++ +A+++  R ++       ++  +D  +  + +A A L+ A++ 
Sbjct: 110 LISQASAGVVAAQADKLRAEQQLSRAKKLKVSNYSSQDDVDQLQAGFDSAAAGLDEAKAL 169

Query: 182 --KQEQAQIALDSEVGGENTTVAQLLAELRKAEFDLEQTIVRAPTDGYVTQLALRPGMMS 239
              +E+     ++++    + V Q  A L  A+  L  T V AP  G + +     G   
Sbjct: 170 LVAKERELAVFNAQLNQAGSVVEQSNAALELAKIQLNDTRVTAPFSGVIGKRGAMVGQYV 229

Query: 240 VPLPLAPVMTFVHTEEKIYTAAFRQNSLQRLQPGFAAEFMFRALPGKVFKGEVIEVLPAI 299
            P     + + V       TA F++  +Q +QPG + +    A P K F G +  + PA 
Sbjct: 230 QPGQA--LYSLVPDGAVWITANFKETQIQHMQPGQSVQVSLDAFPDKTFTGVIDSLSPAS 287

Query: 300 G 300
           G
Sbjct: 288 G 288