Pairwise Alignments

Query, 1084 a.a., protease from Vibrio cholerae E7946 ATCC 55056

Subject, 1104 a.a., peptidase S41 (RefSeq) from Shewanella loihica PV-4

 Score =  218 bits (556), Expect = 2e-60
 Identities = 275/1139 (24%), Positives = 473/1139 (41%), Gaps = 124/1139 (10%)

Query: 1    MHLPH-FALSSVLSLTLCAIPNLGFASSNQTEDS--TQARPTWLRDIALSPDGQKIAFTY 57
            M L H FA  ++   T  + P     + N   +S  T+    + R  A+   G  + FT 
Sbjct: 1    MKLSHLFACCAIALGTASSAPLFAAQAENVKAESQATEQNVGYYRSPAIH--GDTLVFTA 58

Query: 58   AGQIWLVPAQGGDAVALTESGVYSETPIWSPDSQSIAFTADRYGLGDVFILSIQGGESRR 117
             G +W+       A  LT           S D Q +AF A+  G  +V+++ IQGG ++R
Sbjct: 59   EGDLWIQQLGDAQARRLTSLPAQELGAAISNDGQQLAFVANYEGASEVYVMPIQGGVAKR 118

Query: 118  LTYHGAKDIPYAFSADGQQLYFSSRRLGDDKANANVKQGSFMAQLYSVPAAGGREQRVLP 177
            +++  ++     ++ DG+ LY +    G   AN  V        L SV       Q  LP
Sbjct: 119  VSFENSRVRVQGWTPDGKVLYATDNAFG--PANYWV--------LRSVDPESLTTQD-LP 167

Query: 178  IAISDLAISPSHSDILYTNQ------PSDEQPWRKGALSDATRDIWQW--------SPLT 223
            +A +   +  +  + +Y  +        + + +R GA      ++W++         PLT
Sbjct: 168  LADAIEGVVDNAGEYVYFTRFGLQATGDNAKVYRGGAKG----ELWRYKLGSDQEAQPLT 223

Query: 224  GKHTQITTFRGEDRNPVWSADGSSMYYLSEQAGSFNVWQQRFDGSEPVQITDHQKLPVRF 283
             +H       G  R P+   D   +Y++S+ +G+ N+W    DG +  Q+T      VR 
Sbjct: 224  AEHD------GSVRQPMLWQD--RLYFVSDSSGNDNIWSMTLDGKDLRQLTQFSDWQVRG 275

Query: 284  LSASLQGDLAYGFDGEIWRLKAGAKQAEKVPVSIRRSAMPDGRHNVNFNLE-ATEMVVAP 342
                 QG + +    +I      + Q   + + +         H VN  ++ AT   +AP
Sbjct: 276  ARLE-QGRVVFQQGADIKLYDIASNQVSTLDIHLTSDFPERREHWVNKPMKYATSTSLAP 334

Query: 343  NAAEVAIVARGDVYVVSL-LSGLTQRITDTPEAERDVSFSSDGYRLIYASEREGSWNLYQ 401
            N  +V I AR  V +     S L +         R    S DG  +   S+  G   +++
Sbjct: 335  NGDKVVITARSHVALAGTDGSRLVELGLPGDYRVRGAVMSPDGKWVYGISDASGEQEIWR 394

Query: 402  SYVNDGGKSFSSSLDIIEEPVLTTEQDVIQPL--YSPNLKRIVYRENRNTLKVYDIEQDK 459
             Y  DG           E   LT +   ++     SP+ + I + +    L + D+++ +
Sbjct: 395  -YSADGSD---------EAKQLTQDGKALRMALSLSPDGRYIAHDDYNGDLWLLDLKKGR 444

Query: 460  TYTLL-DAHALYSYFDKDLSYQWSPDSEYI-VTRD-RAMSNGDIQLLKFDGSEAPINLSQ 516
               +L +   L  Y D      WS DS +I VT+D R      I L   +   A   L+ 
Sbjct: 445  NSKILTNGQGLGPYGD----VVWSNDSRFIAVTKDERGQLRPQIVLYSLEEERAEA-LTS 499

Query: 517  SGFSEFAPQFSADGQWVYWLTDAK---------GLRDIDDMV-VQYDVYGVALNREAKFN 566
              +  F+P FS DGQW+Y++++ +         G R++  +   +  ++ +AL  +A F 
Sbjct: 500  DKYESFSPAFSDDGQWLYFISNREFNATPTSPWGDRNMGPVFDKRGQIFALALTPKAVFP 559

Query: 567  FNKTQE--QLWLEEEIAAEKNLGPGQNPPAELTVVENKGLKQRTMRMTPTSLNIIFKHLT 624
            F+K  E  Q   +EE AA+K        PA+ T V+ +GL +R  ++   S N     +T
Sbjct: 560  FSKPNELNQPAAKEEEAAKK--------PAK-TQVQWQGLSKRLWQVPVASGNYSQLQVT 610

Query: 625  HDNQALIIAYQLGDSVQISEI-NLRSGEMTAL---FNRLSEDAALLAMASDDASLLIM-- 678
                     Y L +SV  ++  NL   +   L       SED A  A++ DD+ L +   
Sbjct: 611  EKG-----LYMLANSVDRAQAPNLMWVKFDPLGPKVETFSEDVASYALSGDDSKLFLRRH 665

Query: 679  GEHGIENLNVLTGES--------KFVRYEAKANFDFRAEIAYLFDHVWRLTQTKFYDPQM 730
             + G E L V TGES        K    + +     + E   +F+  W + +  F+D +M
Sbjct: 666  SKGGAEMLIVDTGESLPKDLAHAKVQTEQWQLAISPQLEWQQMFEDAWLMHRDSFFDKKM 725

Query: 731  HGVDWQQYGDLYRKHLPSIRTYSDFAELLSEMVGDLNVSHTGAFFMAGNSSWEEPASLGL 790
             G+DWQ     Y+  L  +    +  ++  +M+G+L+  H+            +P    L
Sbjct: 726  RGLDWQATKAKYQPLLARLTDRHELNDIFMQMMGELDALHSQVRGGDLPLDPNQPQGANL 785

Query: 791  YYDDRYRGKGVRVKSL------LP--GGPADTYQSPIKAGAIIYSVNGKEISDQQDIYPF 842
                    +GV++  +      LP    P        K G II ++NGK + +  D+   
Sbjct: 786  GARLLQTKQGVQIAHIYQNDAELPQQASPLARVDVDAKVGDIILAINGKPVENVADVARH 845

Query: 843  LNFTQGKLTRLSVLVPGEEKAQNFTLVPITLEEESELLYEQWVEQRRALVETLSDGRLGY 902
            L     K   L+  +  +  +    ++P+    +++L Y  WV      V   +DG +GY
Sbjct: 846  LRNQADKQVLLT--LKRDRNSFKTIVLPVANRADAKLRYLDWVNNNNQKVAKAADGEIGY 903

Query: 903  VHLAAMDAASFEQMQNDMFGLEKDKLGLVVDVRFNAGGWLHDQVMEILSGTRHSVMQTRD 962
            +HL AM +        + +    +K GL++DVR N GG +   ++E L        Q   
Sbjct: 904  LHLYAMGSGDIANFAREFYA-NIEKKGLIIDVRRNRGGNIDSWIIEKLLRRAWMFWQPTQ 962

Query: 963  GYVVSSFPERRWAKPSIMLANADSYSDGSIVPYFYQKEGLGKLVGERVPGTGTAVIWEQQ 1022
            G   ++  ++ +    ++L +  +YSDG       +  GL  L+G++  G G   +W   
Sbjct: 963  G-TPNTNMQQTFRGHLVVLTDQLTYSDGETFSAGIKALGLAPLIGKQTAGAG---VWLSG 1018

Query: 1023 QEPGLIYGVPQLGIKDE---QGRWF-ENQEIIPDILVYNDPESVVAGEDRQLAAAVEAL 1077
            +      G+ ++    +    GRW  E + I PDI V N P +   GED QL  A+  L
Sbjct: 1019 RNSLTDKGMARVAEYPQYAMDGRWIVEGRGISPDIEVDNLPHATFKGEDAQLNKALNYL 1077