Pairwise Alignments

Query, 408 a.a., sodium/glutamate symporter from Vibrio cholerae E7946 ATCC 55056

Subject, 402 a.a., sodium/glutamate symport carrier protein GltS from Phaeobacter inhibens DSM 17395

 Score =  240 bits (613), Expect = 5e-68
 Identities = 146/413 (35%), Positives = 229/413 (55%), Gaps = 18/413 (4%)

Query: 1   MNQIISIGALESFLIAISVLFLGHFINAKLPILTKFNIPEPIVGGLIVACVITALH-FHG 59
           M+  I+I    S  +  +V  LG  +N ++P+L +FNIPEP+ GGL+ A V+  ++   G
Sbjct: 1   MDAQINIPDFISLTLGFAVYLLGARLNERVPVLRRFNIPEPVSGGLLAAVVVMIIYSVGG 60

Query: 60  IDMEFSLPLQNVFMLMFFSTVGLAANYTQLIKGGAKVFLFLAVASVFIIIQNGVGVSLAA 119
             + F +  ++  +++FF+ +GL A    L+ GG  + L L +  + I+ QN +G + A 
Sbjct: 61  WAITFEMATRDYLLVLFFAGIGLNARLADLVAGGRPLVLLLILTFLAILAQNVIGAAGAL 120

Query: 120 GLGLDPLLGLIAGSITLSGGHGTGAAWANTFAENYGLANTLEIAMASATFGLIIGGIIGS 179
             G    + ++ GS  L GGHGT  AWA   A   GL    E+ +A AT GL++  ++G 
Sbjct: 121 LFGYPLQVSVLFGSAALIGGHGTAIAWAPDVAAQTGLTGAAELGVAVATLGLVLAALVGG 180

Query: 180 PVAQKLVDKHGIESEYGRGTQTHSRFPELVTYN-EYEEDKVTAKKVIEILFILLICVTGA 238
           PVA+ L+++HG+         T +R  E  T    ++ + V A   + ++ ++L      
Sbjct: 181 PVARFLINRHGL---------TPARPDEEPTVGLAHDAEDVPAIDHLSLMRVMLHL--NV 229

Query: 239 KYLEAWVKTFEI--RWLMIPDFVYALFIGVFITNL-LEVTKLRKVDAET--VDILGTVSL 293
             +  +  +F +    L +P FV  L  G+ + NL + V       A T  + ++   SL
Sbjct: 230 AIIIGYFSSFALDAAGLKLPLFVPCLIAGIVLANLRMGVMPNAAPVARTPALALISEFSL 289

Query: 294 SLFLAMALMSLKLWNIFDLALPFLVILAIQSVVLGVFCYFVTFKVMGANYDAAVISAGHC 353
             FLAM+LMSL+LW +  L L   VI+  Q+V    F  FV F  +G  Y AAV++AG  
Sbjct: 290 GAFLAMSLMSLQLWTLSSLGLAIAVIMLAQTVFTVAFVLFVLFPFLGRGYRAAVLAAGFG 349

Query: 354 GFGLGATPTAVMNMGSVVKRFGPSPQAFMVVPIVGAFFIDIVNLIILQGYISF 406
           GF LGATPTA+ NM +V KR+GPSP AF+V+P+V AFF+DI N I++Q  ++F
Sbjct: 350 GFALGATPTAIANMTAVTKRYGPSPIAFVVLPLVSAFFVDIANAIVIQAIVNF 402