Pairwise Alignments

Query, 408 a.a., sodium/glutamate symporter from Vibrio cholerae E7946 ATCC 55056

Subject, 407 a.a., sodium/glutamate symporter (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  562 bits (1448), Expect = e-165
 Identities = 275/407 (67%), Positives = 334/407 (82%), Gaps = 1/407 (0%)

Query: 1   MNQIISIGALESFLIAISVLFLGHFINAKLPILTKFNIPEPIVGGLIVACVITALHFHGI 60
           M+   +IG LESFLIAI VLF+GH IN  + +  ++NIPEPIVGGL+VA VI  LHF  I
Sbjct: 1   MHTTYTIGELESFLIAIFVLFIGHSINRHVRVFKQYNIPEPIVGGLVVAAVIAFLHFQDI 60

Query: 61  DMEFSLPLQNVFMLMFFSTVGLAANYTQLIKGGAKVFLFLAVASVFIIIQNGVGVSLAAG 120
            + FSLP+QN  MLMFFST+GL+ANY  L+ GG KVF+FL VASV+IIIQN VGVSLA+ 
Sbjct: 61  TLAFSLPMQNTLMLMFFSTIGLSANYKLLLSGGKKVFIFLGVASVYIIIQNAVGVSLASL 120

Query: 121 LGLDPLLGLIAGSITLSGGHGTGAAWANTFAENYGLANTLEIAMASATFGLIIGGIIGSP 180
           LGLDP+LGLIAGSITLSGGHGTG AW+ TFAENYG+ NTLE AMA+ATFGL++GGIIG P
Sbjct: 121 LGLDPILGLIAGSITLSGGHGTGVAWSQTFAENYGI-NTLEFAMAAATFGLVMGGIIGGP 179

Query: 181 VAQKLVDKHGIESEYGRGTQTHSRFPELVTYNEYEEDKVTAKKVIEILFILLICVTGAKY 240
           VAQ+L+ KH + S YG G + H+  P+LVTY++ EED+VTAK +IE LF+LL CV GAK+
Sbjct: 180 VAQRLISKHNLVSSYGVGRKHHATHPQLVTYDQLEEDQVTAKTIIETLFVLLFCVAGAKW 239

Query: 241 LEAWVKTFEIRWLMIPDFVYALFIGVFITNLLEVTKLRKVDAETVDILGTVSLSLFLAMA 300
               V  + + WL +PDFVYALF+GV I N+ EVT+  K   E++D++GTV+LSLFL+MA
Sbjct: 240 FTVLVSEYGLNWLKMPDFVYALFLGVVIANITEVTRGYKPHTESIDVIGTVALSLFLSMA 299

Query: 301 LMSLKLWNIFDLALPFLVILAIQSVVLGVFCYFVTFKVMGANYDAAVISAGHCGFGLGAT 360
           LM+LKLW I DLA+P L+IL +Q+ VL VF YFVTFKVMG+NYDAAVI+ GHCGFG+GAT
Sbjct: 300 LMNLKLWEILDLAIPLLIILVVQTAVLAVFAYFVTFKVMGSNYDAAVITGGHCGFGMGAT 359

Query: 361 PTAVMNMGSVVKRFGPSPQAFMVVPIVGAFFIDIVNLIILQGYISFL 407
           PTAVMNMG++V R GPSPQAFMVVPIVGAFFIDIVNLI+LQGY+SF+
Sbjct: 360 PTAVMNMGALVSRTGPSPQAFMVVPIVGAFFIDIVNLIVLQGYLSFI 406