Pairwise Alignments

Query, 308 a.a., DUF368 domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 316 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score =  399 bits (1024), Expect = e-116
 Identities = 198/301 (65%), Positives = 238/301 (79%)

Query: 6   MNYLSTYLKGLAMGAADVVPGVSGGTIAFITGIYDTLLESIRRINPSLLKVWKAQGLAGV 65
           M YL TY KG+AMGAADVVPGVSGGTIAFITGI D LL SIR++NPSL+ V + QGL   
Sbjct: 1   MKYLLTYFKGMAMGAADVVPGVSGGTIAFITGILDPLLNSIRKVNPSLIGVIRQQGLKAA 60

Query: 66  FRHINGLFLITLFGGIFTSIATLAKLISWLLVTHPIPIWSFFFGLILVSVWHMLRQIEQK 125
           F HING FLI +FGGI TSI TLAKLI++LL +HPIP+WSFFFGLI++SV HML+Q++  
Sbjct: 61  FMHINGPFLIAVFGGILTSIFTLAKLITYLLHSHPIPVWSFFFGLIIISVVHMLKQVKGF 120

Query: 126 KLSRLLWLIAGAIFAYGITVLKPLHLEPTYINVLISGAIAICAMILPGISGSFILLLIGM 185
            + RL     G  FA+GITVL P+ ++ TY+NV I G+IAICAM+LPGISGSFILLL+G+
Sbjct: 121 SVGRLALFALGVAFAWGITVLHPIDMQMTYLNVFIGGSIAICAMLLPGISGSFILLLLGL 180

Query: 186 YAPVLGAVKTFQLDILLIFLTGCVIGLLSFSHILSWLLRRYRDVTLTFLTGLMLGTLPKI 245
           Y  VLGA K+  + +LL F +GCV GLLSFSH+LS LLR+Y D TL FLTGLMLGTL KI
Sbjct: 181 YTSVLGAAKSLDIPVLLTFASGCVAGLLSFSHLLSALLRKYHDATLIFLTGLMLGTLGKI 240

Query: 246 WPWKETLSWRVNSSGEQVPLLQRNLSPFEFETLTSQPSQWLLALVLMLAAVALVLGLEKY 305
           WPWK+ L+WR NS+GEQVPLL++NLSP  FE LT QP+Q  LA+  MLA +ALV  LE +
Sbjct: 241 WPWKQVLTWRENSAGEQVPLLEQNLSPMNFEQLTGQPAQLGLAICAMLAGIALVWALEYF 300

Query: 306 A 306
           A
Sbjct: 301 A 301