Pairwise Alignments

Query, 308 a.a., DUF368 domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 292 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  387 bits (993), Expect = e-112
 Identities = 194/291 (66%), Positives = 229/291 (78%)

Query: 18  MGAADVVPGVSGGTIAFITGIYDTLLESIRRINPSLLKVWKAQGLAGVFRHINGLFLITL 77
           MGAADVVPGVSGGTIAFITGI DTLLES++RINPSL  V K+QGL G F HING FL++L
Sbjct: 1   MGAADVVPGVSGGTIAFITGILDTLLESVKRINPSLWGVIKSQGLKGAFVHINGGFLVSL 60

Query: 78  FGGIFTSIATLAKLISWLLVTHPIPIWSFFFGLILVSVWHMLRQIEQKKLSRLLWLIAGA 137
             GI TSI T AKLISWLLV HPIPIWSFFFGLI++SV HML+Q+    L+RL     G 
Sbjct: 61  LAGILTSIFTFAKLISWLLVAHPIPIWSFFFGLIIISVVHMLKQVSGFTLARLGLFALGV 120

Query: 138 IFAYGITVLKPLHLEPTYINVLISGAIAICAMILPGISGSFILLLIGMYAPVLGAVKTFQ 197
           + A+ ITVL P+ +E +Y+N+   GAIAICAM+LPGISGSFILLL+G+Y  VL A K  Q
Sbjct: 121 LVAWAITVLNPVAVEASYLNLFFGGAIAICAMVLPGISGSFILLLLGLYPVVLAAAKNIQ 180

Query: 198 LDILLIFLTGCVIGLLSFSHILSWLLRRYRDVTLTFLTGLMLGTLPKIWPWKETLSWRVN 257
           LDIL  F  G V+GLL+FSH+LS LLR+Y D T+ FLTGLMLGTL KIWPWK+TL+W+ N
Sbjct: 181 LDILACFAAGAVLGLLTFSHLLSALLRKYHDATVIFLTGLMLGTLGKIWPWKQTLTWQTN 240

Query: 258 SSGEQVPLLQRNLSPFEFETLTSQPSQWLLALVLMLAAVALVLGLEKYAEK 308
           S GEQVPLL++N+SP  FE +T QPSQ L A+V MLAA+ALV GLEK   +
Sbjct: 241 SHGEQVPLLEQNISPLNFEQVTGQPSQLLFAIVCMLAAIALVWGLEKVGRR 291



 Score = 37.0 bits (84), Expect = 6e-07
 Identities = 25/97 (25%), Positives = 44/97 (45%), Gaps = 11/97 (11%)

Query: 7   NYLSTYLKGLAMGAADVVPGVSGGTIAFITGIYDTLLESIRRINPSLLKVWKAQGLAGV- 65
           +YL+ +  G     A V+PG+SG  I  + G+Y  +L + + I   +L  + A  + G+ 
Sbjct: 137 SYLNLFFGGAIAICAMVLPGISGSFILLLLGLYPVVLAAAKNIQLDILACFAAGAVLGLL 196

Query: 66  -FRHINGLFL-------ITLFGGIFTSIATLAKLISW 94
            F H+    L       +    G+   + TL K+  W
Sbjct: 197 TFSHLLSALLRKYHDATVIFLTGLM--LGTLGKIWPW 231