Pairwise Alignments

Query, 193 a.a., SCO family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 201 a.a., Twin-arginine translocation pathway signal from Pseudomonas syringae pv. syringae B728a

 Score = 77.4 bits (189), Expect = 2e-19
 Identities = 43/130 (33%), Positives = 70/130 (53%), Gaps = 4/130 (3%)

Query: 42  DNQQAVAIFDQADPRIRIVYFGFTRCPDVCPTSLAMLSAALNQVDDKTKAQLRPMFISLD 101
           D+Q  V         + +++FGFT+CP +CPT+LA  +     + ++ K  L+ +FI+LD
Sbjct: 52  DSQGNVKTLSSFRGLMPMIFFGFTQCPAICPTALARAAQIRKLMGEEGKT-LQVVFITLD 110

Query: 102 PERDDAKLAAQYAHYFHPMIEGLSGSVATTNQIAQKYGVIFRKTELPNSELKYTLDHSSY 161
           PERD  ++   Y   F P    LSG++  T   A+++GV F K  L ++   YT+ H++ 
Sbjct: 111 PERDTPEVIDAYVKAFDPTFVALSGTLEETAATAKEFGVFFEKVPLGDT---YTISHTAT 167

Query: 162 FYFLQPDGTL 171
            Y     G L
Sbjct: 168 SYVYDTRGVL 177