Pairwise Alignments

Query, 193 a.a., SCO family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 199 a.a., cytochrome C oxidase assembly factor transmembrane protein from Sinorhizobium meliloti 1021

 Score = 85.9 bits (211), Expect = 4e-22
 Identities = 56/193 (29%), Positives = 98/193 (50%), Gaps = 11/193 (5%)

Query: 5   WSLILVVAFTLGF-SIKAYLDSQQKLAAQVTTPLTLSGDNQQAVAIFDQA-DPRIRIVYF 62
           W  ILV+   LG+ +       QQ  +     P TL   N + +   ++A   +   ++F
Sbjct: 9   WVAILVMVAVLGWLTFDMTQPKQQAASGPFGVPFTLVAQNGEQIT--EKAFTGKPTALFF 66

Query: 63  GFTRCPDVCPTSLAMLSAALNQVDDKTKAQLRPMFISLDPERDDAKLAAQYAHYFHPMIE 122
           GFT CP+VCPT+L  L+  L++VD +   +L+  FI++DPERD  ++  QY       I 
Sbjct: 67  GFTHCPEVCPTTLFELNGWLDKVDPEGN-KLQAYFITVDPERDTPEVLGQYVSNVSKRIT 125

Query: 123 GLSGSVATTNQIAQKYGVIFRKTELPNSELK----YTLDHSSYFYFLQPDGTLINKVPHT 178
           G+SG      ++ + Y V ++K  +P  E K    YT+DH++  + L  +G     + + 
Sbjct: 126 GISGPPDKVLEMVKGYRVYYKK--VPTDEAKPDGDYTMDHTASVFLLDANGQFSGTIAYG 183

Query: 179 QDPTPIVDAIKKV 191
           ++P   V  ++ +
Sbjct: 184 ENPETAVKKLENL 196