Pairwise Alignments

Query, 193 a.a., SCO family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 211 a.a., electron transport protein SCO1/SenC (RefSeq) from Shewanella loihica PV-4

 Score = 70.1 bits (170), Expect = 3e-17
 Identities = 50/175 (28%), Positives = 85/175 (48%), Gaps = 7/175 (4%)

Query: 8   ILVVAFTLGFSIKAYLDSQQKLAAQVTTPLTLSGDNQQAVAIFDQADPRIRIVYFGFTRC 67
           I  V FT   +    L S +    +  +P  L+  N +A       D +  + + G+T C
Sbjct: 19  IAAVNFTGQATPPELLTSYRYPQQRPLSPFELTDQNGKAFTNARLKD-KWSLFFVGYTSC 77

Query: 68  PDVCPTSLAMLSAALNQVDDKTKAQLRPMFISLDPERDDAKLAAQYAHYFHPMIEGLSGS 127
           PDVCPT+L  L+AA  Q++     Q+  +F+S+DP RD       Y ++F+P    ++  
Sbjct: 78  PDVCPTTLGKLAAAYQQLEGVVDLQV--VFLSVDPARDTQVKLKDYINFFNPNFIAVTAP 135

Query: 128 VATTNQIAQKYGVIFRKTELPNSELKYTLDHSSYFYFLQPDGTLINKV-PHTQDP 181
            +    + ++ G ++  T +   E  Y +DHS+    + PDGT +  V P + DP
Sbjct: 136 HSQLLPLTRELGFVY--TMVGEGE-NYQVDHSASMVLISPDGTRVATVKPTSLDP 187