Pairwise Alignments

Query, 405 a.a., serine/threonine transporter SstT from Vibrio cholerae E7946 ATCC 55056

Subject, 419 a.a., symporter for L-glutamate, L-glutamine, and L-proline (from data) from Pseudomonas stutzeri RCH2

 Score =  129 bits (324), Expect = 2e-34
 Identities = 106/402 (26%), Positives = 188/402 (46%), Gaps = 11/402 (2%)

Query: 7   LARLVRGNLVLQILAGILLGAAMATFSPEYAQKVGLIGNLFVGALKAVAPVLVFILVASS 66
           L  LVR  L  QIL G+ LG A        AQ +  IG LF+ A+K +   LVF+ + + 
Sbjct: 11  LRLLVRLPLWQQILIGLALGVAAGMAFGADAQLLAPIGTLFLNAIKMLIVPLVFVSLVAG 70

Query: 67  IANQKKNQHTYMRPI--VVLYLFGTFSAALTAVILSFLFPTTLVLATGAEGATPPQGIAE 124
           I + + +       +  + +YL  T  A    ++   LF     +   A G    +    
Sbjct: 71  ITSMQDSAKLGRISLKTIAIYLVTTAFAVSIGLLFGALFSPGEGMNMVASGNEQAKQAPS 130

Query: 125 VLNTLLFKLVDNPVSALMNANYIGILAWGVGLGLALH---HSSSTTKAVFEDLSHGISQI 181
           +++ L+  +  NPV+A    N + I+ + + LG++++      +    +F+ L+    ++
Sbjct: 131 LVSILVGLVPANPVTAFAEGNILQIIVFAIALGVSINLIGERGAPAVRLFDALAETFYKL 190

Query: 182 VRFIIRLAPFGIFGLVASTFATTGFDALAGYAQLLAVLLGAMAFIALVVNPMIVYYKIRR 241
              ++R+AP G+F L A    + G + L   A ++ V+  A     L+V   ++    R 
Sbjct: 191 TDLVMRVAPIGVFALTAGVVGSHGAEVLLPLAGVIGVIYLASIAHVLLVYGGLLGLLARL 250

Query: 242 NPFPLVLQCLRESGVTAFFTRSSAANIPVNMALCEK-LKLDEDTYSVSIPLGATINMAGA 300
           NP     Q +  +   AF T SS+  +PV++    K L + E      +P+GATINM G 
Sbjct: 251 NPLRF-FQGIAPALAVAFSTSSSSGTLPVSIECARKNLGVSEGVAGFVLPVGATINMDGT 309

Query: 301 AITITVLTLAAVHTMGIEVDLMTALLLSVVAAVSACGASGVAGGSLLLIPLACGLFGISN 360
           AI   VL L      GI++      ++ + A +++ G +G+ G  L+++    GL   + 
Sbjct: 310 AIYQGVLALFIAQAFGIDLSAGQYAMIILTATLASIGTAGIPGAGLIML----GLVLTAA 365

Query: 361 DIAMQVVAVGFIIGVIQDSAETALNSSTDALFTAAVCQAEHE 402
            + ++ VA+   I  I D A T +N + D + T  V ++E E
Sbjct: 366 GLPLEGVALIAGIDRILDMARTTVNVAGDLMTTTLVGRSEQE 407