Pairwise Alignments

Query, 405 a.a., serine/threonine transporter SstT from Vibrio cholerae E7946 ATCC 55056

Subject, 437 a.a., symporter for L-glutamate, L-glutamine, and L-aspartate (from data) from Shewanella amazonensis SB2B

 Score =  140 bits (354), Expect = 6e-38
 Identities = 113/407 (27%), Positives = 202/407 (49%), Gaps = 29/407 (7%)

Query: 13  GNLVLQILAGILLGAAMATF--SPEYAQKV------GLIGNLFVGALKAVAPVLVFI-LV 63
           G +++ + AGIL+G  +  F    E+ Q         +IG +F+ +LK +   LVFI LV
Sbjct: 13  GKILIGMGAGILIGLLLRNFFGGSEWVQDYITEGFFHVIGTIFINSLKMLVVPLVFISLV 72

Query: 64  ASSIANQKKNQHTYMR-PIVVLYLFGTFSAALTAVILSFLF-PTTLVLATGAE--GATPP 119
             + +  + ++   +    +  YLF T  A + A+  + L  P    LA+ +    A   
Sbjct: 73  CGTCSLSEPSKLGRLGGKTLAFYLFTTAIALVVAISAAVLVQPGNASLASESMQYSAKEA 132

Query: 120 QGIAEVLNTLLFKLVDNPVSALMNANYIGILAWGVGLGLALHHSSSTTK---AVFEDLSH 176
             +A+VL  ++     NP+ AL   N + I+ + V  G A+ H     +   A+F+DL+ 
Sbjct: 133 PSLADVLINIV---PSNPMKALSEGNMLQIIIFAVIFGFAISHIGERGRRVAALFDDLNE 189

Query: 177 GISQIVRFIIRLAPFGIFGLVASTFATTGFDALAGYAQLLAVLLGAMAFIALVVNPMIVY 236
            I ++V  I++LAP+G+F L+     T G + L    +   ++L  + F   VV P ++ 
Sbjct: 190 VIMRVVTLIMQLAPYGVFALMGKLALTLGMETLESVIKYFMLVLVVLLFHGFVVYPTLLK 249

Query: 237 YKIRRNPFPLVLQCLRESGVTAFFTRSSAANIPVNMALCE-KLKLDEDTYSVSIPLGATI 295
                +P  + ++ +R+  + AF T SS A +PV M   E +L  D    S ++PLGATI
Sbjct: 250 LFSGLSPL-MFIRKMRDVQLFAFSTASSNATLPVTMEASEHRLGADNKVASFTLPLGATI 308

Query: 296 NMAGAAITITVLTLAAVHTMGIEVDLMTALLLSVVAAVSACGASGVAGGSLLLIPLACGL 355
           NM G AI   V T+      GI++ +    ++ + A +++ G +GV G  L+++ +    
Sbjct: 309 NMDGTAIMQGVATVFIAQVFGIDLTITDYAMVVMTATLASIGTAGVPGVGLVMLAM---- 364

Query: 356 FGISNDIAMQVVAVGFIIGV--IQDSAETALNSSTDALFTAAVCQAE 400
             + N + + V  +  I+GV  + D   TA+N + D + T  + ++E
Sbjct: 365 --VLNQVGLPVEGIALILGVDRMLDMVRTAVNVTGDTVATVVIAKSE 409