Pairwise Alignments

Query, 405 a.a., serine/threonine transporter SstT from Vibrio cholerae E7946 ATCC 55056

Subject, 447 a.a., Sodium:dicarboxylate symporter (NCBI) from Rhodospirillum rubrum S1H

 Score =  102 bits (253), Expect = 3e-26
 Identities = 91/405 (22%), Positives = 173/405 (42%), Gaps = 26/405 (6%)

Query: 15  LVLQILAGILLGAAMATFSPEYAQKVGLIGNLFVGALKAVAPVLVFILVASSIA---NQK 71
           L +Q+L  I+ G  +  F P+    +  +G+ F+  +K +   ++F+ V + IA   + +
Sbjct: 20  LYVQVLVAIVAGVLLGHFYPDLGSALKPLGDAFIKLVKMIIAPVIFLTVVTGIAGLTDMQ 79

Query: 72  KNQHTYMRPIVVLYLFGTFSAALTAVILSFLFP-------TTLVLATGAEGATPPQGIAE 124
           K      + ++    F T +  +  ++ + + P          + A   +  T       
Sbjct: 80  KVGRVAGKAMIYFLSFSTLALIIGMIVANVVHPGSGLNIDPASLDAKAVQTYTSHAHDQS 139

Query: 125 VLNTLLFKLVDNPVSALMNANYIGILAWGVGLGLALHHSSSTTKAVFE---DLSHGISQI 181
           ++  L+  +   P+SA  + + + +L + V  G+AL       K V +    L   + ++
Sbjct: 140 LVGFLMNIIPSTPISAFASGDILQVLFFAVLFGIALATVGERGKPVLDLLNPLLQVVFRL 199

Query: 182 VRFIIRLAPFGIFGLVASTFATTGFDALAGYAQLLAVLLGAMAFIALVVNPMIVYYKIRR 241
           V  +++ AP G FG +A T    G  ++A  A L+            VV  ++  Y    
Sbjct: 200 VAIVMKAAPLGAFGAMAFTIGKYGIGSIANLAMLVGTFYLTSGLFVFVVLGLVARY---- 255

Query: 242 NPFPL--VLQCLRESGVTAFFTRSSAANIPVNMALCEKLKLDEDTYSVSIPLGATINMAG 299
           N F L  +L+ ++E  +    T SS A +P  M   E+    +    + +P G + N+ G
Sbjct: 256 NGFSLLALLRYIKEELLLVLGTSSSEAALPTLMEKLERAGCKKSVVGLVVPTGYSFNLDG 315

Query: 300 AAITITVLTLAAVHTMGIEVDLMTALLLSVVAAVSACGASGVAGGSLLLIPLACGLFGIS 359
             I +T+  L       I++ L   +LL +VA +S+ GA+G+ G     I LA  L  + 
Sbjct: 316 TNIYMTLAALFIAQATNIDLSLQDQILLLLVAMLSSKGAAGITGAG--FITLAATLSVVP 373

Query: 360 NDIAMQVVAVGFIIGV--IQDSAETALNSSTDALFTAAVCQAEHE 402
              ++ V  +  I+GV           N   +A+ T  V + E E
Sbjct: 374 ---SVPVAGMALILGVDRFMSECRALTNFIGNAVATIVVAKWEGE 415