Pairwise Alignments

Query, 405 a.a., serine/threonine transporter SstT from Vibrio cholerae E7946 ATCC 55056

Subject, 408 a.a., sodium:dicarboxylate symporter (RefSeq) from Shewanella loihica PV-4

 Score =  125 bits (313), Expect = 3e-33
 Identities = 104/394 (26%), Positives = 182/394 (46%), Gaps = 24/394 (6%)

Query: 13  GNLVLQILAGILLGAAMATFSPEYAQKVGLIGNLFVGALKAVAPVLVFILVASSIANQKK 72
           GN+ +Q++  +++GAA+     E A     +G LF+  +K +   LV + + S  A+   
Sbjct: 10  GNIGVQVVIAMIIGAAVGFIMGEQASMFAPLGTLFIHLIKMLVIPLVLVSIISGAASLGD 69

Query: 73  NQHTYMRPIVVLYLFGTFS--AALTAVILSFLFPT------TLVLATGAEGATPPQG-IA 123
           +       I     F   S  A   A++L  LF        T   A+G    T   G + 
Sbjct: 70  SPSAGKIGIGTFGFFIITSGVAVALALLLGSLFQPGNGVDFTAHSASGLMKVTEEHGALP 129

Query: 124 EVLNTLLFKLVDNPVSALMNANYIGILAWGVGLGLALH----HSSSTTKAVFEDLSHGIS 179
            V++T +  +  N   +L   N + IL + +  G+AL       S    A    +     
Sbjct: 130 GVMDTFIGMIPTNVFESLTGGNILQILVFSIFFGIALTKVKGEGSKPILAALNTIVDAFV 189

Query: 180 QIVRFIIRLAPFGIFGLVASTFATTGFDALAGYAQLLAVLLGAMAFIALVVNPMIV--YY 237
            ++  ++ +AP G+FGL+A +  T GFDAL    +L AV +  +     +  P++V  + 
Sbjct: 190 WMINCVMVIAPIGVFGLMADSVGTFGFDALEVVFKLFAVFVLGILLFGFLFFPLLVQLFS 249

Query: 238 KIRRNPFPLVLQCLRESGVTAFFTRSSAANIPVNMALCEK-LKLDEDTYSVSIPLGATIN 296
            +    F   +  +++  V A  T SS A +PVNM  CE+ L + + T S  +PLGATIN
Sbjct: 250 NVSAKKF---ISVMKKPQVMALSTASSMATLPVNMETCEEELGVSKPTASFVLPLGATIN 306

Query: 297 MAGAAITITVLTLAAVHTMGIEVDLMTALLLSVVAAVSACGASGVAGGSLLLIPLACGLF 356
           M+G AI   ++ +      GI++ L   + +   + + A G +GV G S L++ +     
Sbjct: 307 MSGNAIYYGLVAIFFAQMYGIDLSLGAYMAIIFTSTLGAIGQAGVPGPSFLVVAVL---- 362

Query: 357 GISNDIAMQVVAVGFIIGVIQDSAETALNSSTDA 390
            ++  I +  + + F +  + D   T+LN + DA
Sbjct: 363 -LAAGIPIDGLPLLFALDRVFDMIRTSLNITGDA 395