Pairwise Alignments

Query, 405 a.a., serine/threonine transporter SstT from Vibrio cholerae E7946 ATCC 55056

Subject, 439 a.a., sodium:dicarboxylate symporter (RefSeq) from Shewanella loihica PV-4

 Score =  147 bits (370), Expect = 8e-40
 Identities = 115/407 (28%), Positives = 202/407 (49%), Gaps = 27/407 (6%)

Query: 13  GNLVLQILAGILLGAAMATFSP------EYAQK--VGLIGNLFVGALKAVAPVLVFI-LV 63
           G +++ +  GIL G  + +F P      EY     + ++G++F+ +L+ +   LVFI LV
Sbjct: 13  GKILIGMAGGILTGLLLRSFFPGSEFIEEYITNGLLNVVGSIFISSLQMLVVPLVFISLV 72

Query: 64  ASSIA-NQKKNQHTYMRPIVVLYLFGTFSAALTAVILSFLF-PTTLVLATGAEGATPPQG 121
             + + +   +        +  YLF T  A   A++++ L  P    LA  AE       
Sbjct: 73  CGTCSLSDPSSLGRLGGKTIAFYLFTTAIALSMAILVALLVHPGNASLA--AENMQYSVK 130

Query: 122 IAEVLNTLLFKLVD-NPVSALMNANYIGILAWGVGLGLALHHSSSTTK---AVFEDLSHG 177
            A  L+ +L  LV  NP+ A+   N + I+ + V  G A+ H     K   A+F DL+  
Sbjct: 131 EAPSLSDVLINLVPRNPIQAMTEGNMLQIIIFAVIFGFAISHIGERGKRVSALFNDLNEV 190

Query: 178 ISQIVRFIIRLAPFGIFGLVASTFATTGFDALAGYAQLLAVLLGAMAFIALVVNPMIVYY 237
           I ++V  I++LAP+GIF L+     T G +      +   V+L  +   A V  P+++  
Sbjct: 191 IMRVVTLIMQLAPYGIFALMGKLALTLGLETFESVVKYFMVVLAVLLVHAFVSYPVLLKL 250

Query: 238 KIRRNPFPLVLQCLRESGVTAFFTRSSAANIPVNMALCE-KLKLDEDTYSVSIPLGATIN 296
               +PF  + + +R+  + AF T SS A +PV +   E +L +D    S ++PLGATIN
Sbjct: 251 FSGLSPFTFIRK-MRDVQLFAFSTASSNATLPVTLETSEHRLGVDNKVASFTLPLGATIN 309

Query: 297 MAGAAITITVLTLAAVHTMGIEVDLMTALLLSVVAAVSACGASGVAGGSLLLIPLACGLF 356
           M G AI   V T+      GI++ +    ++ V A +++ G +GV G  L+++ +     
Sbjct: 310 MDGTAIMQGVATVFIAQVFGIDLTITDYAMVVVTATLASIGTAGVPGVGLIMLAM----- 364

Query: 357 GISNDIAMQVVAVGFIIGV--IQDSAETALNSSTDALFTAAVCQAEH 401
            + N + + V  +  I+GV  + D   TA+N + D++ T  + ++E+
Sbjct: 365 -VLNQVGLPVEGIALIMGVDRLLDMVRTAVNVTGDSVATVIIAKSEN 410