Pairwise Alignments

Query, 405 a.a., serine/threonine transporter SstT from Vibrio cholerae E7946 ATCC 55056

Subject, 416 a.a., sodium:dicarboxylate symporter (RefSeq) from Shewanella loihica PV-4

 Score =  115 bits (289), Expect = 2e-30
 Identities = 93/395 (23%), Positives = 190/395 (48%), Gaps = 24/395 (6%)

Query: 18  QILAGILLGAAMATFSPEYAQKVGLIGNLFVGALKAVAPVLVF---ILVASSIANQKKNQ 74
           ++LAG +LG  +     E A ++  +G+LF+ A+K +   L+F   ++  +S+ N    +
Sbjct: 13  KVLAGFILGVGLGVVLGEQATQLKPLGDLFIAAIKMLVAPLIFCAIVVSITSLGNDVSLK 72

Query: 75  HTYMRPIVVLYLFGTFSAALTAVILSFL-FPTTLVLATGAEGATPPQGIAEVLNTLLFKL 133
              ++ + +  L GT ++ +   I S +    +L LAT         G A+V   LL  +
Sbjct: 73  RLSIKTLAMFMLTGTIASLIGLAIGSLIDMGGSLELATTEVRERNVPGFAQV---LLDMI 129

Query: 134 VDNPVSALMNANYIGILAWGVGLGLALH---HSSSTTKAVFEDLSHGISQIVRFIIRLAP 190
             NP ++L     + I+ +   +G+A++     +   K   E  +  + Q+ R +++L P
Sbjct: 130 PVNPFASLAEGKVLQIIVFAALVGIAINKIGEKAEPLKRTIEAGAEVMFQLTRMVLQLTP 189

Query: 191 FGIFGLVASTFATTGFDALAGYAQLLAVLLGAMAFIALVVNPMIVYYKIRRNPFPL-VLQ 249
            G+FGL+A      G   L    + +  +     +IA +++ + VY  + R    L  +Q
Sbjct: 190 IGVFGLMAWVVGEYGLSTLLPLGKFIGAI-----YIAALIHMVFVYGGLVRFGAGLSAVQ 244

Query: 250 CLRE---SGVTAFFTRSSAANIPVNMALCEKLKLDEDTYSVSIPLGATINMAG-AAITIT 305
             R+   + + AF T SS   +P +    E + + +   +  +PLGAT+NM G   I   
Sbjct: 245 FFRKAMPAQLVAFTTASSFGTLPASTRATETMGVSKKYGAFVLPLGATMNMDGCGGIYPA 304

Query: 306 VLTLAAVHTMGIEVDLMTALLLSVVAAVSACGASGVAGGSLLLIPLACGLFGISNDIAMQ 365
           +  +      GI +++   +L++V A V++ G +GV G +++++ +  G+ G+  +    
Sbjct: 305 IAAIFIAQIYGIPLEMTDYMLIAVTATVASVGTAGVPGSAMVMLSVTLGVVGLPLEGIAF 364

Query: 366 VVAVGFIIGVIQDSAETALNSSTDALFTAAVCQAE 400
           + ++  +I +I+    TA N + D +    V ++E
Sbjct: 365 IASIDRVIDMIR----TATNVTGDMMTAVVVGKSE 395