Pairwise Alignments

Query, 405 a.a., serine/threonine transporter SstT from Vibrio cholerae E7946 ATCC 55056

Subject, 433 a.a., sodium:dicarboxylate symporter (RefSeq) from Shewanella loihica PV-4

 Score =  137 bits (344), Expect = 8e-37
 Identities = 116/416 (27%), Positives = 198/416 (47%), Gaps = 24/416 (5%)

Query: 2   QNNSFLARLVRG----NLVLQILAGILLGAAMATFSPEYAQKVGLIGNLFVGALKAVAPV 57
           Q +S+L R   G     L LQIL G+LLG        E A  +  IG LFV  +K +   
Sbjct: 5   QTSSWLGRAWSGWMSVPLWLQILIGMLLGICAGLGLGEQAVLLKPIGTLFVNTIKMLIVP 64

Query: 58  LVF---ILVASSIANQKKNQHTYMRPIVVLYLFGTFSAALTA--VILSFLFPTTLVLATG 112
           LVF   I+  +S+ +  K      +     +  GT S A+T    +   + P   +  T 
Sbjct: 65  LVFCSLIVGVTSMQDTAKMGRIGFKSFA--FYLGTTSIAITLGLAVGHIMQPGAGLAMTS 122

Query: 113 AEGATPPQGIAEVLNTLLFKLVDNPVSALMNANYIGILAWGVGLGLAL----HHSSSTTK 168
           AE     + +  ++ TL+  +  NP++AL +   + ++ + V LG+AL     H     K
Sbjct: 123 AESHNAVKEVPSIMETLINIVPTNPIAALASGQILQVIVFAVALGIALVLIGDHGKPAIK 182

Query: 169 AVFEDLSHGISQIVRFIIRLAPFGIFGLVASTFATTGFDALAGYAQ-LLAVLLGAMAFIA 227
            VFE L+  + ++   +++LAP+G+FGL+A      G D L    + +LAV +G    I 
Sbjct: 183 -VFESLAEAMYKLTDMVMKLAPYGVFGLMAWVAGEYGMDMLMPLIKVILAVYIGCALHI- 240

Query: 228 LVVNPMIVYYKIRRNPFPLVLQCLRESGVTAFFTRSSAANIPVNMALC-EKLKLDEDTYS 286
           +    +++ +  + NP     + +  +   A+ T SSA  +P +M    E L +++   S
Sbjct: 241 IGFYSLVLTFVAKLNPMQF-FKGISNALAVAYTTSSSAGTLPASMKCASESLGINKKISS 299

Query: 287 VSIPLGATINMAGAAITITVLTLAAVHTMGIEVDLMTALLLSVVAAVSACGASGVAGGSL 346
             +PLG TINM G A+   V  L      GI++  +  + + + A +++ G +GV G  L
Sbjct: 300 FVLPLGTTINMDGTALYQGVTALFVAQAFGIDLTWVDYITIILTATLASIGTAGVPGAGL 359

Query: 347 LLIPLACGLFGISNDIAMQVVAVGFIIGVIQDSAETALNSSTDALFTAAVCQAEHE 402
           +++ L     G    + ++ VA+   I  I D A T +N S D + T  + ++E E
Sbjct: 360 VMLTLVLTTVG----LPLEGVAIIAGIDRILDMARTVVNVSGDLVATTVIAKSEDE 411