Pairwise Alignments

Query, 405 a.a., serine/threonine transporter SstT from Vibrio cholerae E7946 ATCC 55056

Subject, 413 a.a., proton/glutamate symporter, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  116 bits (290), Expect = 1e-30
 Identities = 92/396 (23%), Positives = 190/396 (47%), Gaps = 23/396 (5%)

Query: 18  QILAGILLGAAMATFSPEYAQKVGLIGNLFVGALKAVAPVLVF---ILVASSIANQKKNQ 74
           ++L G +LGA +     E A  +  +G+LF+ A+K +   LVF   ++  +S+ +Q   +
Sbjct: 14  KVLTGFILGALVGVLLGESATVLKPLGDLFISAIKMLVAPLVFCSIVVSITSLGSQTNLK 73

Query: 75  HTYMRPIVVLYLFGTFSAALTAVILSFL-FPTTLVLATGAEGATPPQGIAEVLNTLLFKL 133
              ++ + +  L GT ++ +   + S +    T+ LAT         G A+V   LL  +
Sbjct: 74  RLSIKTLGMFMLTGTIASLIGLAVGSLIDMGGTMQLATTEVRERNIPGFAQV---LLDMI 130

Query: 134 VDNPVSALMNANYIGILAWGVGLGLALH---HSSSTTKAVFEDLSHGISQIVRFIIRLAP 190
             NP ++L     + I+ +   +G+A++     +   K   E  +  + Q+ R +++L P
Sbjct: 131 PINPFASLAEGKVLQIIVFAALVGIAINKVGEKAEPLKRTIEAGAEVMFQLTRMVLKLTP 190

Query: 191 FGIFGLVASTFATTGFDALAGYAQLLAVLLGAMAFIALVVNPMIVYYKIRRNPFPLVLQC 250
            G+FGL+A      G   L    + +A +     +IA +V+ + VY    +      +Q 
Sbjct: 191 IGVFGLMAWVVGEYGLSTLLPLGKFIAAI-----YIAALVHMIFVYGGFVKLAGLSPIQF 245

Query: 251 LRE---SGVTAFFTRSSAANIPVNMALCEKLKLDEDTYSVSIPLGATINMAG-AAITITV 306
            R+   + + AF T SS   +P +    E + + +   +  +PLGAT+NM G   I   +
Sbjct: 246 FRKALPAQLVAFSTSSSFGTLPASTRAVETMGVSKRYSAFVMPLGATMNMDGCGGIYPAI 305

Query: 307 LTLAAVHTMGIEVDLMTALLLSVVAAVSACGASGVAGGSLLLIPLACGLFGISNDIAMQV 366
             +      GI +D +  ++++V A +++ G +GV G +++++ +  G+ G+  +    +
Sbjct: 306 AAIFIAQIYGIPLDTLDYVMIAVTATIASVGTAGVPGSAMVMLTVTLGVIGLPLEGIAFI 365

Query: 367 VAVGFIIGVIQDSAETALNSSTDALFTAAVCQAEHE 402
            ++  II +I+    T  N + D +    + ++E+E
Sbjct: 366 ASIDRIIDMIR----TTTNVTGDMMTAVVIGKSENE 397