Pairwise Alignments

Query, 405 a.a., serine/threonine transporter SstT from Vibrio cholerae E7946 ATCC 55056

Subject, 408 a.a., sodium/dicarboxylate symporter (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  637 bits (1644), Expect = 0.0
 Identities = 324/402 (80%), Positives = 366/402 (91%)

Query: 2   QNNSFLARLVRGNLVLQILAGILLGAAMATFSPEYAQKVGLIGNLFVGALKAVAPVLVFI 61
           Q +SFLA+L  G+LVLQIL GI+ G A+A+FS E+A++V  +G+LFVGALKA+AP+LVFI
Sbjct: 3   QESSFLAKLANGSLVLQILVGIIAGVALASFSHEWAKQVAFLGSLFVGALKAIAPILVFI 62

Query: 62  LVASSIANQKKNQHTYMRPIVVLYLFGTFSAALTAVILSFLFPTTLVLATGAEGATPPQG 121
           LVASSIANQKKN  T MRPIVVLYL GTF+AALTAVILS +FPTTLVLA G EG +PPQG
Sbjct: 63  LVASSIANQKKNTQTNMRPIVVLYLLGTFAAALTAVILSMMFPTTLVLAAGVEGTSPPQG 122

Query: 122 IAEVLNTLLFKLVDNPVSALMNANYIGILAWGVGLGLALHHSSSTTKAVFEDLSHGISQI 181
           I+EV++TLLFKLVDNPV+ALM  NYIGILAWGVGLGLALHHSS +TK VF D+SHGISQ+
Sbjct: 123 ISEVISTLLFKLVDNPVNALMTGNYIGILAWGVGLGLALHHSSDSTKQVFADVSHGISQM 182

Query: 182 VRFIIRLAPFGIFGLVASTFATTGFDALAGYAQLLAVLLGAMAFIALVVNPMIVYYKIRR 241
           V FIIRLAP GIFGLVA+TFA TGF A+AGYAQLLAVLLGAMAFIAL++NP+IVY KI+R
Sbjct: 183 VHFIIRLAPIGIFGLVAATFAETGFAAIAGYAQLLAVLLGAMAFIALIINPLIVYVKIKR 242

Query: 242 NPFPLVLQCLRESGVTAFFTRSSAANIPVNMALCEKLKLDEDTYSVSIPLGATINMAGAA 301
           NP+PLV++CLRESG+TAFFTRSSAANIPVNMALCEKLKL EDTY+VSIPLGATINM GAA
Sbjct: 243 NPYPLVIRCLRESGMTAFFTRSSAANIPVNMALCEKLKLHEDTYAVSIPLGATINMGGAA 302

Query: 302 ITITVLTLAAVHTMGIEVDLMTALLLSVVAAVSACGASGVAGGSLLLIPLACGLFGISND 361
           ITITVLTLAA HT+GI+VDL+TALLLSVVAA+SACGASGVAGGSLLLIPLAC LFGISND
Sbjct: 303 ITITVLTLAAAHTLGIQVDLLTALLLSVVAAISACGASGVAGGSLLLIPLACSLFGISND 362

Query: 362 IAMQVVAVGFIIGVIQDSAETALNSSTDALFTAAVCQAEHEK 403
           +AMQVVAVGFIIGVIQD+AETALNSSTD +FTAA C+A   K
Sbjct: 363 VAMQVVAVGFIIGVIQDAAETALNSSTDVIFTAAACEAAENK 404