Pairwise Alignments

Query, 405 a.a., serine/threonine transporter SstT from Vibrio cholerae E7946 ATCC 55056

Subject, 437 a.a., sodium:dicarboxylate symporter family protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  129 bits (324), Expect = 2e-34
 Identities = 103/376 (27%), Positives = 182/376 (48%), Gaps = 29/376 (7%)

Query: 42  LIGNLFVGALKAVAPVLVFI-LVASSIANQKKNQHTYMR-PIVVLYLFGTFSAALTAVIL 99
           +IG +F+ +LK +   LVFI LV  + +  + ++   +    +  YLF T  A + AV  
Sbjct: 50  VIGTIFISSLKMLVVPLVFISLVCGTCSLSEPSKLGRLGGKTLAFYLFTTVLALVLAVFA 109

Query: 100 SFLF-PTTLVLAT------GAEGATPPQGIAEVLNTLLFKLVDNPVSALMNANYIGILAW 152
           + +  P    LA         E  +  Q I +++ T       NPV A+   N + I+ +
Sbjct: 110 AVIVHPGDATLANEKLNYVAKEAPSFAQVIIDMMPT-------NPVQAMSEGNMLQIIIF 162

Query: 153 GVGLGLALHHSSSTTKAV---FEDLSHGISQIVRFIIRLAPFGIFGLVASTFATTGFDAL 209
            V  G A+ H       +   F+DL++ I ++V  +++LAP+G+F L+A    T G +  
Sbjct: 163 AVIFGFAIAHLGERGNRIAQLFDDLNNVIMRVVTLVMQLAPYGVFALMAKLALTLGLETF 222

Query: 210 AGYAQLLAVLLGAMAFIALVVNPMIVYYKIRRNPFPLVLQCLRESGVTAFFTRSSAANIP 269
               +   ++L  +     V   +++      NP  + ++ +R+  + AF T SS A +P
Sbjct: 223 GSVVKYFFLVLTLLLIHNFVTYSILLKAFSGLNPL-IFIRKMRDVQLFAFSTASSNATLP 281

Query: 270 VNMALCE-KLKLDEDTYSVSIPLGATINMAGAAITITVLTLAAVHTMGIEVDLMTALLLS 328
           + +   E +L +D    S ++PLGATINM G AI   V T+      GIE+ L     + 
Sbjct: 282 ITIEASEHRLGVDNKIASFTLPLGATINMDGTAIMQGVATVFIAQVFGIELSLTDYAAVI 341

Query: 329 VVAAVSACGASGVAGGSLLLIPLACGLFGISNDIAMQVVAVGFIIGV--IQDSAETALNS 386
           V A +++ G +GV G  L+++ +      + N + + V  +  IIGV  + D   TA+N 
Sbjct: 342 VTATLASIGTAGVPGVGLIMLAM------VLNQVGLPVEGIALIIGVDRLLDMVRTAVNV 395

Query: 387 STDALFTAAVCQAEHE 402
           + D + T  + ++E E
Sbjct: 396 TGDCVATVIIAKSEGE 411