Pairwise Alignments

Query, 405 a.a., serine/threonine transporter SstT from Vibrio cholerae E7946 ATCC 55056

Subject, 412 a.a., proton/glutamate symporter (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  122 bits (306), Expect = 2e-32
 Identities = 101/399 (25%), Positives = 181/399 (45%), Gaps = 34/399 (8%)

Query: 13  GNLVLQILAGILLGAAMATFSPEYAQKVGLIGNLFVGALKAVAPVLVFILVASSIANQKK 72
           GN+ +Q++  +++GA +     E A     +G +F+  +K +   LV + + S  A+   
Sbjct: 8   GNIGVQVVIAMIIGALVGFMMGESASIFAPLGTIFIHLIKMLVIPLVLVSIISGAASLGD 67

Query: 73  NQHTYMRPIVVLYLF---GTFSAALTAVILSFLFP-----------TTLVLATGAEGATP 118
           +       +     F      + AL  V+ S   P           + L+  T   GA P
Sbjct: 68  SPSAGKIGVGTFGFFIITSGLAVALALVMGSIFTPGAGVDFTAHSSSDLMEVTKEHGALP 127

Query: 119 PQGIAEVLNTLLFKLVDNPVSALMNANYIGILAWGVGLGLALHH----SSSTTKAVFEDL 174
                 V++T +  +  N   +L   N + IL + +  G+AL       +    A    +
Sbjct: 128 G-----VIDTFIGMIPTNVFESLNGGNILQILVFSIFFGIALTKVKGDGAKPIMAALNTV 182

Query: 175 SHGISQIVRFIIRLAPFGIFGLVASTFATTGFDALAGYAQLLAVLLGAMAFIALVVNPMI 234
                 ++  ++ +AP G+FGL+A +  T GFDAL    +L AV + A+     V  P++
Sbjct: 183 VDAFVWMINCVMVIAPIGVFGLMADSVGTFGFDALEVVFKLFAVFVAAILIYGFVFFPLV 242

Query: 235 V--YYKIRRNPFPLVLQCLRESGVTAFFTRSSAANIPVNMALCEK-LKLDEDTYSVSIPL 291
           V  + K+    F   +  +++  V A  T SS A +PVNM  CE+ LK+ + T +  +PL
Sbjct: 243 VQLFSKVSARQF---ISAMKKPQVMALSTASSMATLPVNMETCEEDLKVSKATTAFVLPL 299

Query: 292 GATINMAGAAITITVLTLAAVHTMGIEVDLMTALLLSVVAAVSACGASGVAGGSLLLIPL 351
           GATINM+G AI   ++ +       I++ +     +   + + A G +GV G S L++ +
Sbjct: 300 GATINMSGNAIYYGLVAMFFAQMYNIDLSMTAYAAIIFTSTLGAIGQAGVPGPSFLVVAV 359

Query: 352 ACGLFGISNDIAMQVVAVGFIIGVIQDSAETALNSSTDA 390
                 ++  I +  + + F +  + D   TALN + DA
Sbjct: 360 L-----LAAGIPIDGLPLLFALDRVFDMIRTALNITGDA 393