Pairwise Alignments

Query, 405 a.a., serine/threonine transporter SstT from Vibrio cholerae E7946 ATCC 55056

Subject, 440 a.a., sodium:dicarboxylate symporter (RefSeq) from Shewanella sp. ANA-3

 Score =  131 bits (330), Expect = 3e-35
 Identities = 112/403 (27%), Positives = 188/403 (46%), Gaps = 28/403 (6%)

Query: 15  LVLQILAGILLGAAMATFSPEYAQKVGLIGNLFVGALKAVAPVLVFILVASSIANQKKNQ 74
           L LQI  G++LG A+     E A  +  IG LFV  +K +   LVF    S I      +
Sbjct: 21  LWLQIFVGMVLGIAVGVSLGEQASYLKPIGTLFVNTIKMLIVPLVF---CSLIVGVTSME 77

Query: 75  HTYMRPIVVLYLFGTFSAALTAVILSFLFPTTLVLATGA-------EGATPPQGIAEVLN 127
            T     +    F  F    TA+ +S       V+  GA       E     + +  V+ 
Sbjct: 78  DTAKMGRIGFKSFA-FYLCTTAIAISLGLAVGYVVQPGAGVPLLQHEAVQTAKEVPSVMQ 136

Query: 128 TLLFKLVDNPVSALMNANYIGILAWGVGLGLAL----HHSSSTTKAVFEDLSHGISQIVR 183
           TL+  +  NPV+AL +   + ++ + V LG+AL     H     K VFE L+  + ++  
Sbjct: 137 TLIDIVPTNPVAALASGQILQVIVFAVALGIALVLIGDHGKPAIK-VFESLAEAMYKLTD 195

Query: 184 FIIRLAPFGIFGLVASTFATTGFDALAGYAQ-LLAVLLGAMAFIALVVNPMIVYYKIRRN 242
            +++LAP+G+FGL+A      G D L    + ++AV +G +  + L    +++    + N
Sbjct: 196 MVMKLAPYGVFGLMAWVAGEYGIDMLWPLIKVIIAVYIGCIIHV-LGFYSIVLRLFAKLN 254

Query: 243 PFPLVLQCLRESGVTAFFTRSSAANIPVNMALC-EKLKLDEDTYSVSIPLGATINMAGAA 301
           P     + +  +   AF T SSA  +P +M    E L +++   S  +PLG TINM G A
Sbjct: 255 PLHF-FKGISNAMAVAFTTSSSAGTLPASMKCASEYLGVNKKISSFVLPLGTTINMDGTA 313

Query: 302 ITITVLTLAAVHTMGIEVDLMTALLLSVVAAVSACGASGVAGGSLLLIPLACGLFGISND 361
           +   V  L      GI++  +  L + + A +++ G +GV G  L+++ L      + + 
Sbjct: 314 LYQGVTALFVAQAFGIDLTWVDYLTIILTATLASIGTAGVPGAGLVMLTL------VLST 367

Query: 362 IAMQVVAVGFIIGV--IQDSAETALNSSTDALFTAAVCQAEHE 402
           + + +  V  I G+  I D A T +N S D + T  + ++E E
Sbjct: 368 VGLPLEGVALIAGIDRILDMARTVVNVSGDLVATTVIAKSEDE 410